RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CCDC14Q49A88 953 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 HIBCHQ6NVY1 386 aaPredicted RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 LRRC52Q8N7C0 313 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 BBOF1Q8ND07 529 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 TRPV1Q8NER1 839 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 APPL2Q8NEU8 664 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 FAM172AQ8WUF8 416 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 USP6NLQ92738 828 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 KATNAL1Q9BW62 490 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 MLXIPLQ9NP71 852 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 DERAQ9Y315 318 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 SYNJ2BP-COX16A0A087WUM0 186 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 A6NNZ2 444 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 DNALI1O14645 258 aaPredicted RBP12.33□□□□□ -0.44
VTA1-203ENST00000452973 HUS1O60921 280 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 GABBR2O75899 941 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
VTA1-203ENST00000452973 CREB1P16220 341 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 SDC4P31431 198 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 MAGEA4P43358 317 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 CRYBB1P53674 252 aaPredicted RBP12.33□□□□□ -0.44
VTA1-203ENST00000452973 TRIM32Q13049 653 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 TUBB8Q3ZCM7 444 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 TAX1BP1Q86VP1 789 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 FAM228AQ86W67 206 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 UNC45BQ8IWX7 931 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 TTC39CQ8N584 583 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 SMG8Q8ND04 991 aaKnown RBP12.33□□□□□ -0.44
VTA1-203ENST00000452973 KBTBD7Q8WVZ9 684 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 LPPQ93052 612 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 PGM2Q96G03 612 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 MAGEB5Q9BZ81 275 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 COX16Q9P0S2 106 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 TPX2Q9ULW0 747 aaKnown RBP12.33□□□□□ -0.44
VTA1-203ENST00000452973 GABRQQ9UN88 632 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 HTTP42858 3142 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 M0QZ92 97 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 PIAS1O75925 651 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 CD4P01730 458 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 RBP3P10745 1247 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 GNAT1P11488 350 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 RABGGTBP53611 331 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 OLFML1Q6UWY5 402 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 ZBED8Q8IZ13 594 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 SLC35F5Q8WV83 523 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 TSPYL1Q9H0U9 437 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 RRP15Q9Y3B9 282 aaKnown RBP12.33□□□□□ -0.44
VTA1-203ENST00000452973 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.44
VTA1-203ENST00000452973 CDY2AQ9Y6F7 541 aa12.33□□□□□ -0.44
VTA1-203ENST00000452973 CLDN5O00501 218 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 TAF6P49848 677 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 SLC6A3Q01959 620 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 LRRC14Q15048 493 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 BBS12Q6ZW61 710 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 CMASQ8NFW8 434 aaPredicted RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 SLC35B2Q8TB61 432 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 FAM129AQ9BZQ8 928 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 VPS37BQ9H9H4 285 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 PIRO00625 290 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 ITGAVP06756 1048 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 AXLP30530 894 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 MLH1P40692 756 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 CTCFP49711 727 aaPredicted RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 BASP1P80723 227 aaKnown RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 EMC10Q5UCC4 262 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 DARS2Q6PI48 645 aaKnown RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 ADGRF2Q8IZF7 708 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 ARHGEF2Q92974 986 aaKnown RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 WNT8BQ93098 351 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 NKD2Q969F2 451 aaPredicted RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 FAM149B1Q96BN6 582 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 GMNCA6NCL1 334 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 POC1B-GALNT4F8VUJ3 575 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 H7C0C1 242 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 MCF2LO15068 1137 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 AGTP01019 485 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 ATP5OP48047 213 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 LILRA4P59901 499 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 PDIA2Q13087 525 aaKnown RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 STILQ15468 1287 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 CA9Q16790 459 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 ZCCHC9Q8N567 271 aaKnown RBP12.32□□□□□ -0.44
VTA1-203ENST00000452973 ANKRD42Q8N9B4 389 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 P3H4Q92791 437 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 ZNF560Q96MR9 790 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 GAD1Q99259 594 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 ST3GAL5Q9UNP4 418 aa12.32□□□□□ -0.44
VTA1-203ENST00000452973 XPOTO43592 962 aaKnown RBP12.31□□□□□ -0.44
VTA1-203ENST00000452973 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms