RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ASIC5Q9NY37 505 aa2.91□□□□□ -1.94
LRCH3-209ENST00000452660 KLHL13Q9P2N7 655 aa2.91□□□□□ -1.94
LRCH3-209ENST00000452660 RGS17Q9UGC6 210 aaPredicted RBP2.91□□□□□ -1.94
LRCH3-209ENST00000452660 CCNL1Q9UK58 526 aaPredicted RBP2.91□□□□□ -1.94
LRCH3-209ENST00000452660 PSMD9O00233 223 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 UNC5CO95185 931 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 AHSGP02765 367 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 ALPLP05186 524 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 GKP32189 559 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 ME1P48163 572 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 RPS13P62277 151 aaKnown RBP2.9□□□□□ -1.95
LRCH3-209ENST00000452660 E2F1Q01094 437 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 SP2Q02086 613 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 CFHR1Q03591 330 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 EXOSC9Q06265 439 aaKnown RBP2.9□□□□□ -1.95
LRCH3-209ENST00000452660 PLS1Q14651 629 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 LARS2Q15031 903 aaKnown RBP2.9□□□□□ -1.95
LRCH3-209ENST00000452660 PGS1Q32NB8 556 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 CAND1Q86VP6 1230 aaKnown RBP2.9□□□□□ -1.95
LRCH3-209ENST00000452660 KRT78Q8N1N4 520 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 OSR1Q8TAX0 266 aaPredicted RBP2.9□□□□□ -1.95
LRCH3-209ENST00000452660 EFHD1Q9BUP0 239 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 SNX15Q9NRS6 342 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 TMX2Q9Y320 296 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 HS3ST3B1Q9Y662 390 aa2.9□□□□□ -1.95
LRCH3-209ENST00000452660 A0A087WWL8 130 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 FOXN3O00409 490 aaPredicted RBP2.89□□□□□ -1.95
LRCH3-209ENST00000452660 SMAD6O43541 496 aaKnown RBP2.89□□□□□ -1.95
LRCH3-209ENST00000452660 GCATO75600 419 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 CTSAP10619 480 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 HDCP19113 662 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 CDK11BP21127 795 aaKnown RBP2.89□□□□□ -1.95
LRCH3-209ENST00000452660 KCNA3P22001 575 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 CCND1P24385 295 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 NANOS2P60321 138 aaKnown RBP2.89□□□□□ -1.95
LRCH3-209ENST00000452660 ODF1Q14990 250 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 PTPN21Q16825 1174 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 TRIM71Q2Q1W2 868 aaKnown RBP2.89□□□□□ -1.95
LRCH3-209ENST00000452660 CERCAMQ5T4B2 595 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 VSTM1Q6UX27 236 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 PTCHD4Q6ZW05 846 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 SKAP1Q86WV1 359 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 KBTBD7Q8WVZ9 684 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 MAP4K1Q92918 833 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 SLC35A4Q96G79 324 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 PRR25Q96S07 402 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 MMS19Q96T76 1030 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 DPH1Q9BZG8 443 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 CXorf36Q9H7Y0 433 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 CNNM1Q9NRU3 951 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 SELENONQ9NZV5 590 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 PCDHA1Q9Y5I3 950 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 FER1L4A9Z1Z3 1794 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 TNKSO95271 1327 aa2.89□□□□□ -1.95
LRCH3-209ENST00000452660 PRSS44E7EML9 344 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 H3BUI4 141 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 MYO1CO00159 1063 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 TMPRSS11DO60235 418 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 PMPCBO75439 489 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 SLC11A2P49281 568 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 ARFIP2P53365 341 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 BCAT1P54687 386 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 CCNIQ14094 377 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 KHDC1LQ5JSQ8 128 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 PDXDC1Q6P996 788 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 ANKRD13BQ86YJ7 626 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 BCAS4Q8TDM0 211 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 MTMR8Q96EF0 704 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 FOXP1Q9H334 677 aaPredicted RBP2.88□□□□□ -1.95
LRCH3-209ENST00000452660 XPNPEP3Q9NQH7 507 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 PIH1D1Q9NWS0 290 aaKnown RBP2.88□□□□□ -1.95
LRCH3-209ENST00000452660 ZSCAN32Q9NX65 697 aa2.88□□□□□ -1.95
LRCH3-209ENST00000452660 USP12O75317 370 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 SNUPNO95149 360 aaKnown RBP2.87□□□□□ -1.95
LRCH3-209ENST00000452660 PDE8BO95263 885 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 CRYABP02511 175 aaKnown RBP2.87□□□□□ -1.95
LRCH3-209ENST00000452660 T-ENOLP0DO92 83 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 HOXD9P28356 352 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-209ENST00000452660 EPHA3P29320 983 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 ALDH5A1P51649 535 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-209ENST00000452660 UCP3P55916 312 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 CFHR3Q02985 330 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 KRT17Q04695 432 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 TMTC4Q5T4D3 741 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 RNF187Q5TA31 235 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-209ENST00000452660 DEPDC1Q5TB30 811 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 DAB2IPQ5VWQ8 1189 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 LMBRD2Q68DH5 695 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-209ENST00000452660 C18orf65Q6ZTR6 163 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 CTHRC1Q96CG8 243 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 C1GALT1C1Q96EU7 318 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 MVB12AQ96EY5 273 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 THOC3Q96J01 351 aaKnown RBP2.87□□□□□ -1.95
LRCH3-209ENST00000452660 MRGPRX1Q96LB2 322 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 STXBP5LQ9Y2K9 1186 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 SNX14Q9Y5W7 946 aa2.87□□□□□ -1.95
LRCH3-209ENST00000452660 A0A088AWK7 358 aa2.86□□□□□ -1.95
LRCH3-209ENST00000452660 B4DGG1 531 aa2.86□□□□□ -1.95
LRCH3-209ENST00000452660 hCG_1984214I3L0E3 225 aa2.86□□□□□ -1.95
LRCH3-209ENST00000452660 AP4M1O00189 453 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms