RNA–Protein interactions for RNA: ENST00000452464.6

SCARB2-202, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2 BASIC

Gene SCARB2, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-202ENST00000452464 EGFP01133 1207 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 TRIM49P0CI25 452 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 TRIM49CP0CI26 452 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 TCF3P15923 654 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 WARSP23381 471 aaKnown RBP12.65□□□□□ -0.38
SCARB2-202ENST00000452464 GNL1P36915 607 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-202ENST00000452464 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 CDH8P55286 799 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 USP4Q13107 963 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 PSMD2Q13200 908 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 TRPC3Q13507 836 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 ELF2Q15723 593 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 ZNF77Q15935 545 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 CEP135Q66GS9 1140 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 SYT13Q7L8C5 426 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 OR6B3Q8NGW1 331 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 RIN3Q8TB24 985 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 MYCBPAPQ8TBZ2 947 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 SLITRK1Q96PX8 696 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 SDCBP2Q9H190 292 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 TMEM30AQ9NV96 361 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 C2orf42Q9NWW7 574 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 NXF1Q9UBU9 619 aaKnown RBP12.65□□□□□ -0.38
SCARB2-202ENST00000452464 ARHGAP26Q9UNA1 814 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 PCDHGA5Q9Y5G8 931 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 WNT6Q9Y6F9 365 aa12.65□□□□□ -0.38
SCARB2-202ENST00000452464 SLC9A3R1O14745 358 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-202ENST00000452464 AXIN1O15169 862 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 TACC1O75410 805 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 CLSTN1O94985 981 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 APBB3O95704 486 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 ZNF806P0C7X5 589 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 PXNP49023 591 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-202ENST00000452464 NOP14P78316 857 aaKnown RBP12.64□□□□□ -0.39
SCARB2-202ENST00000452464 ORC1Q13415 861 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 BIRC3Q13489 604 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 EML3Q32P44 896 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 RPLP0P6Q8NHW5 317 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 SYAP1Q96A49 352 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-202ENST00000452464 CHFRQ96EP1 664 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 ELOVL4Q9GZR5 314 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 ARRDC1-AS1Q9H2J1 176 aa12.64□□□□□ -0.39
SCARB2-202ENST00000452464 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 CLDN5O00501 218 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 PDXKO00764 312 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 PHACTR2O75167 634 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-202ENST00000452464 RHOBTB1O94844 696 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 ABL1P00519 1130 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 C4BPAP04003 597 aaKnown RBP12.63□□□□□ -0.39
SCARB2-202ENST00000452464 MYL1P05976 194 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
SCARB2-202ENST00000452464 ATICP31939 592 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 PPM1JQ5JR12 505 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 PKN3Q6P5Z2 889 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 C11orf74Q86VG3 221 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 DDX42Q86XP3 938 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCARB2-202ENST00000452464 SLC9A9Q8IVB4 645 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 ENGASEQ8NFI3 743 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 GOLGA5Q8TBA6 731 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 ZC3H10Q96K80 434 aaKnown RBP12.63□□□□□ -0.39
SCARB2-202ENST00000452464 C8orf48Q96LL4 319 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 SLC22A12Q96S37 553 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 MMRN2Q9H8L6 949 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 GCNT4Q9P109 453 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 ATP8B3O60423 1300 aa12.63□□□□□ -0.39
SCARB2-202ENST00000452464 A8MXQ7 604 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 F8VP50 259 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 EPN2O95208 641 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 ADRB1P08588 477 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 PTPN1P18031 435 aaKnown RBP12.62□□□□□ -0.39
SCARB2-202ENST00000452464 NR2F2P24468 414 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 LIMK1P53667 647 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 AP3M2P53677 418 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 USP46P62068 366 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 CLDN10P78369 228 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 NUCB2P80303 420 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 NCOA4Q13772 614 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 DMC1Q14565 340 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 ZNF699Q32M78 642 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 ZCWPW2Q504Y3 356 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 KBTBD6Q86V97 674 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 PDZD8Q8NEN9 1154 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 HHIPQ96QV1 700 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 TTLL2Q9BWV7 592 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 FBRSL1Q9HCM7 1045 aaKnown RBP12.62□□□□□ -0.39
SCARB2-202ENST00000452464 EBF1Q9UH73 591 aa12.62□□□□□ -0.39
SCARB2-202ENST00000452464 ZNF840PA6NDX5 716 aa12.61□□□□□ -0.39
SCARB2-202ENST00000452464 LEFTY2O00292 366 aa12.61□□□□□ -0.39
SCARB2-202ENST00000452464 CALUO43852 315 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-202ENST00000452464 GDF9O60383 454 aa12.61□□□□□ -0.39
SCARB2-202ENST00000452464 RTN3O95197 1032 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-202ENST00000452464 STAU1O95793 577 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms