RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 SNX3O60493 162 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 SKAP2O75563 359 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 IDH1O75874 414 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 DGKIO75912 1065 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 RTN3O95197 1032 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 GJB6O95452 261 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 BAG3O95817 575 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 FTCDO95954 541 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 AGTP01019 485 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 SSBP05455 408 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 VIMP08670 466 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 RPSAP08865 295 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ALAS1P13196 640 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC5A1P13866 664 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCNB1P14635 433 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 CHN1P15882 459 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 FERP16591 822 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ATF4P18848 351 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 TACR2P21452 398 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ANXA13P27216 316 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 CALML3P27482 149 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 HPDP32754 393 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MCM7P33993 719 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 CTNNA1P35221 906 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 GCKP35557 465 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ACVRL1P37023 503 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 PRKCIP41743 596 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MTIF2P46199 727 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 NT5C2P49902 561 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ALDH5A1P51649 535 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 RPS6KA3P51812 740 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 NPEPPSP55786 919 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MAGOHP61326 146 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 KCNJ2P63252 427 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 LRRC63Q05C16 580 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 KLRC3Q07444 240 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MAP3K12Q12852 859 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 KCNAB2Q13303 367 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 IFIT5Q13325 482 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ORC2Q13416 577 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 RASGRF1Q13972 1273 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 PPP1R7Q15435 360 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 METTL24Q5JXM2 366 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 AP1ARQ63HQ0 302 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 DUPD1Q68J44 220 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 GALNT17Q6IS24 598 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MFSD5Q6N075 450 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MTHFD1LQ6UB35 978 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 PIK3AP1Q6ZUJ8 805 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 UNC13DQ70J99 1090 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 RRAGAQ7L523 313 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 TRPM8Q7Z2W7 1104 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 CROCCP2Q86T23 111 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZNF227Q86WZ6 799 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 DDX42Q86XP3 938 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 RBM12BQ8IXT5 1001 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 EXOC8Q8IYI6 725 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 LRRC34Q8IZ02 419 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ANKRD13CQ8N6S4 541 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MAGEB6Q8N7X4 407 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 SPATA5Q8NB90 893 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 DRAXINQ8NBI3 349 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 TMEM145Q8NBT3 493 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 TBC1D16Q8TBP0 767 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 SH3TC2Q8TF17 1288 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 NUP133Q8WUM0 1156 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZCCHC14Q8WYQ9 949 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 RAPGEF4Q8WZA2 1011 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ESR2Q92731 530 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MAGOHBQ96A72 148 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 THOC1Q96FV9 657 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 WWC2-AS2Q96NR7 200 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 CDK5RAP1Q96SZ6 601 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 PSMB7Q99436 277 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 MMTAG2Q9BU76 263 aaKnown RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZNF747Q9BV97 191 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 BRIP1Q9BX63 1249 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 NACAP1Q9BZK3 213 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 GANQ9H2C0 597 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 BARX1Q9HBU1 254 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ADAM22Q9P0K1 906 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 SUCLA2Q9P2R7 463 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 BAIAP2L1Q9UHR4 511 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 INTUQ9ULD6 942 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 STRIP2Q9ULQ0 834 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 L3MBTL1Q9Y468 752 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC4A4Q9Y6R1 1079 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 A0A1B0GUL6 1792 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 LAMB1P07942 1786 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 CASZ1Q86V15 1759 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 DCCP43146 1447 aa4.44□□□□□ -1.7
HMGB3P22-202ENST00000451823 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 KIAA1551Q9HCM1 1747 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLIT2O94813 1529 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 A0A087X0T9 212 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 FRMD3A2A2Y4 597 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms