RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 FBXL6Q8N531 539 aa12.73□□□□□ -0.37
SMPD4-212ENST00000451542 ANKRD52Q8NB46 1076 aa12.73□□□□□ -0.37
SMPD4-212ENST00000451542 SMOQ99835 787 aa12.73□□□□□ -0.37
SMPD4-212ENST00000451542 RPP25Q9BUL9 199 aaKnown RBP12.73□□□□□ -0.37
SMPD4-212ENST00000451542 NACA2Q9H009 215 aa12.73□□□□□ -0.37
SMPD4-212ENST00000451542 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
SMPD4-212ENST00000451542 TLR8Q9NR97 1041 aaKnown RBP12.73□□□□□ -0.37
SMPD4-212ENST00000451542 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
SMPD4-212ENST00000451542 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
SMPD4-212ENST00000451542 NUP210Q8TEM1 1887 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-212ENST00000451542 XIRP2A4UGR9 3374 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 ZNF840PA6NDX5 716 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 BECN2A8MW95 431 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 MED7O43513 233 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 NARSO43776 548 aaKnown RBP12.72□□□□□ -0.37
SMPD4-212ENST00000451542 CAVIN2O95810 425 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 SETSIPP0DME0 302 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 ACO1P21399 889 aaKnown RBP12.72□□□□□ -0.37
SMPD4-212ENST00000451542 FCARP24071 287 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 CACNA2D1P54289 1103 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 TPM4P67936 248 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 AMPD2Q01433 879 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 GRM2Q14416 872 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 VITQ6UXI7 678 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 TMEM150AQ86TG1 271 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 TADA2BQ86TJ2 420 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMPD4-212ENST00000451542 SIX5Q8N196 739 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 ARHGAP18Q8N392 663 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 RBBP8NLQ8NC74 664 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-212ENST00000451542 ST13P5Q8NFI4 369 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-212ENST00000451542 EXOC4Q96A65 974 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 ASIC4Q96FT7 647 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 NELL2Q99435 816 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 LRRC4Q9HBW1 653 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 TRPV5Q9NQA5 729 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 TSPAN16Q9UKR8 245 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 CA14Q9ULX7 337 aa12.72□□□□□ -0.37
SMPD4-212ENST00000451542 SPTBN5Q9NRC6 3674 aaKnown RBP12.72□□□□□ -0.37
SMPD4-212ENST00000451542 MAN2B1O00754 1011 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 TNFRSF10BO14763 440 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 SLC9A1P19634 815 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 PON1P27169 355 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 USP8P40818 1118 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 TUBP50607 506 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 USP46P62068 366 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 GOLGA8FQ08AF8 430 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 GOLGA8DPQ0D2H9 430 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 FCHO2Q0JRZ9 810 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 BST2Q10589 180 aaKnown RBP12.71□□□□□ -0.37
SMPD4-212ENST00000451542 MLF2Q15773 248 aaPredicted RBP12.71□□□□□ -0.37
SMPD4-212ENST00000451542 CNGA2Q16280 664 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 GOLGA7BQ2TAP0 167 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 ANO6Q4KMQ2 910 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 HECTD3Q5T447 861 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 CDKAL1Q5VV42 579 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 LCLAT1Q6UWP7 414 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 C11orf57Q6ZUT1 292 aaPredicted RBP12.71□□□□□ -0.37
SMPD4-212ENST00000451542 ARHGEF19Q8IW93 802 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 UBR7Q8N806 425 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 ZMIZ2Q8NF64 920 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 FLCNQ8NFG4 579 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 SCAMP5Q8TAC9 235 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 CDK5RAP1Q96SZ6 601 aaKnown RBP12.71□□□□□ -0.37
SMPD4-212ENST00000451542 PRRX2Q99811 253 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 BPIFA3Q9BQP9 254 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 PLA2G2FQ9BZM2 168 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 SMOC2Q9H3U7 446 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 FANCLQ9NW38 375 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 IL37Q9NZH6 218 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 SCML2Q9UQR0 700 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 HCN4Q9Y3Q4 1203 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 DAAM1Q9Y4D1 1078 aa12.71□□□□□ -0.37
SMPD4-212ENST00000451542 A0A0C4DFX4 3053 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 OBSL1O75147 1896 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 O00370 1275 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 SLC9A3R1O14745 358 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 XPO1O14980 1071 aaKnown RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 NCAM2O15394 837 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 TADA3O75528 432 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 BEST1O76090 585 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 RALAP11233 206 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 GLULP15104 373 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 ZNF165P49910 485 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 CLCN5P51795 746 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 KPNA1P52294 538 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 NUBP1P53384 320 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 MLLT6P55198 1093 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 BPIFB4P59827 614 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 PTK2Q05397 1052 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 PDGFRLQ15198 375 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 ARHGAP44Q17R89 818 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 FILIP1LQ4L180 1135 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 SNX30Q5VWJ9 437 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms