RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 NSFP46459 744 aaKnown RBP12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 NCKAP1LP55160 1127 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PLOD1Q02809 727 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PRKG1Q13976 671 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 C6orf52Q5T4I8 152 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 KLC3Q6P597 504 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 MFSD7Q6UXD7 560 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 BBOF1Q8ND07 529 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ZFP28Q8NHY6 868 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 HAPLN3Q96S86 360 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ARMC7Q9H6L4 198 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 S100A14Q9HCY8 104 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ARHGEF4Q9NR80 690 aa12.56□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TPD52L2O43399 206 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 HNRNPCL1O60812 293 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 AVILO75366 819 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 DLDP09622 509 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PABPC4LP0CB38 370 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CDK4P11802 303 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ACTR3P61158 418 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 NAA20P61599 178 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 KCNT1Q5JUK3 1230 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 RNF111Q6ZNA4 994 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 UTS2BQ765I0 119 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TRIM50Q86XT4 487 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PDSS2Q86YH6 399 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 DEFB107AQ8IZN7 70 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 DGCR14Q96DF8 476 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TAGLN3Q9UI15 199 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 FZD1Q9UP38 647 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TCRBV7S3A2A0A539 114 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TRIM49D1C9J1S8 452 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TM7SF2O76062 418 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 MAN1A1P33908 653 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ZNF394Q53GI3 561 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CDHR3Q6ZTQ4 885 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 NUDCD3Q8IVD9 361 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ZC3H3Q8IXZ2 948 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PLEKHO2Q8TD55 490 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 FAM20AQ96MK3 541 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TRIM56Q9BRZ2 755 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 GPRC5CQ9NQ84 441 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 RAB20Q9NX57 234 aa12.55□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CNTNAP1P78357 1384 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 SLC16A4O15374 487 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 MFAP3P55082 362 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 SPOPLQ6IQ16 392 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PPP1R2P3Q6NXS1 205 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 C16orf46Q6P387 395 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 NET1Q7Z628 596 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TRIML2Q8N7C3 387 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 C12orf50Q8NA57 414 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ZNF577Q9BSK1 485 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TCEAL9Q9UHQ7 104 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 NOCTQ9UK39 431 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ASTN2O75129 1339 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 NOP56O00567 594 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 VILLO15195 856 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PDGFRBP09619 1106 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CRABP2P29373 138 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 MLH1P40692 756 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 RGS2P41220 211 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TLR1Q15399 786 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 VWA5B1Q5TIE3 1220 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 KLHL35Q6PF15 583 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 METTL25Q8N6Q8 603 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 RAVER2Q9HCJ3 691 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 RBM47A0AV96 593 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PENKP01210 267 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 PHBP35232 272 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 MAP3K10Q02779 954 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TNFAIP1Q13829 316 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 KBTBD12Q3ZCT8 623 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TXNRD3NBQ6F5E7 133 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ITPRIPL1Q6GPH6 555 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ACAD10Q6JQN1 1059 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 FOXR2Q6PJQ5 311 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 ANKRD23Q86SG2 305 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CCDC33Q8N5R6 958 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TMIGD2Q96BF3 282 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 EURLQ9NYK6 297 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 SENP1Q9P0U3 644 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CLUHO75153 1309 aa12.54□□□□□ -0.4
RAB11FIP3-205ENST00000450428 CYP3A7-CYP3A51PA0A087WV96 503 aa12.53□□□□□ -0.4
RAB11FIP3-205ENST00000450428 TCEA3O75764 348 aa12.53□□□□□ -0.4
RAB11FIP3-205ENST00000450428 SRGAP2CP0DJJ0 459 aa12.53□□□□□ -0.4
RAB11FIP3-205ENST00000450428 SRGAP2BP0DMP2 458 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms