RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 SKA1Q96BD8 255 aa17.62■□□□□ 0.41
SNHG17-207ENST00000449469 LRRC39Q96DD0 335 aa17.62■□□□□ 0.41
SNHG17-207ENST00000449469 RTP4Q96DX8 246 aa17.62■□□□□ 0.41
SNHG17-207ENST00000449469 TRDMT1O14717 391 aaKnown RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 SMNDC1O75940 238 aaKnown RBP eCLIP17.61■□□□□ 0.412e-9■■■■□ 21.6
SNHG17-207ENST00000449469 ACADSP16219 412 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 ATP6V1C1P21283 382 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 ZNF143P52747 638 aaPredicted RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 KCNT1Q5JUK3 1230 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 TTC39BQ5VTQ0 682 aaPredicted RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 CCDC62Q6P9F0 684 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 SLC26A11Q86WA9 606 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 MAP7D3Q8IWC1 876 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 RNF149Q8NC42 400 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 RAB3IL1Q8TBN0 382 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 USP6NLQ92738 828 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 PTCD3Q96EY7 689 aaKnown RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 NSL1Q96IY1 281 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 CPXM1Q96SM3 734 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 CNPY3Q9BT09 278 aa17.61■□□□□ 0.41
SNHG17-207ENST00000449469 SAE1Q9UBE0 346 aaPredicted RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 SCAF8Q9UPN6 1271 aaKnown RBP17.61■□□□□ 0.41
SNHG17-207ENST00000449469 KRT37O76014 449 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 ERBB2P04626 1255 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 ELK3P41970 407 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 MAGEA6P43360 314 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 PDK2Q15119 407 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 ZRSR2Q15696 482 aaKnown RBP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 PLEKHG4Q58EX7 1191 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 SH3D19Q5HYK7 790 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 ATF7IP2Q5U623 682 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 C4orf50Q6ZRC1 276 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 SH2D5Q6ZV89 423 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 KIAA0319LQ8IZA0 1049 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 IQCGQ9H095 443 aaKnown RBP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 RPF1Q9H9Y2 349 aaKnown RBP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 SLC17A7Q9P2U7 560 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 NKX1-2Q9UD57 310 aaPredicted RBP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 CYTH4Q9UIA0 394 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 CHMP2BQ9UQN3 213 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 TTLL13PA6NNM8 815 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 LGR5O75473 907 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 TGM2P21980 687 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 GAD2Q05329 585 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 DARS2Q6PI48 645 aaKnown RBP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 ILDR2Q71H61 639 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 PLPPR4Q7Z2D5 763 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 MICALL2Q8IY33 904 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 MTBPQ96DY7 904 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 ADPGKQ9BRR6 497 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 CALN1Q9BXU9 219 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 FZD8Q9H461 694 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 DENND2DQ9H6A0 471 aaPredicted RBP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 CNTN3Q9P232 1028 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 KANSL3Q9P2N6 904 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 HEY2Q9UBP5 337 aa17.6■□□□□ 0.41
SNHG17-207ENST00000449469 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNHG17-207ENST00000449469 TCRBV7S3A2A0A539 114 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 ZNF487B1APH4 448 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 KBTBD13C9JR72 458 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 TOMM70O94826 608 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 EGFRP00533 1210 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 VDRP11473 427 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 SLC26A2P50443 739 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 MRPS35P82673 323 aaKnown RBP17.59■□□□□ 0.41
SNHG17-207ENST00000449469 ZBTB16Q05516 673 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 DBN1Q16643 649 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 KYAT1Q16773 422 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 RIOX2Q8IUF8 465 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 RFWD2Q8NHY2 731 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 NFKBIZQ9BYH8 718 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 NXF1Q9UBU9 619 aaKnown RBP17.59■□□□□ 0.41
SNHG17-207ENST00000449469 DCTN4Q9UJW0 460 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 KIAA1257Q9ULG3 409 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 TNFSF13BQ9Y275 285 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 A0A0G2JND7 137 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 I3L4J1 428 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 CILPO75339 1184 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 CD48P09326 243 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 DLDP09622 509 aaKnown RBP17.59■□□□□ 0.41
SNHG17-207ENST00000449469 NEFHP12036 1026 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 DESP17661 470 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 GM2AP17900 193 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 GPD1P21695 349 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 SERPINB4P48594 390 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 CNTN2Q02246 1040 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 STILQ15468 1287 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 KBTBD12Q3ZCT8 623 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 ANGEL2Q5VTE6 544 aaKnown RBP17.59■□□□□ 0.41
SNHG17-207ENST00000449469 ATG16L1Q676U5 607 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 SCARA3Q6AZY7 606 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.59■□□□□ 0.41
SNHG17-207ENST00000449469 TEKT4Q8WW24 435 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 HSPH1Q92598 858 aa17.59■□□□□ 0.41
SNHG17-207ENST00000449469 C7orf26Q96N11 449 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms