RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 FSCN2O14926 492 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 TRIM66O15016 1216 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 GJB6O95452 261 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 KLRC2P26717 231 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 MAGEA11P43364 429 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 TPGS2Q68CL5 300 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 OR6B2Q6IFH4 312 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 DNAJC24Q6P3W2 148 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 FAM183BPQ6ZVS7 135 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 XYLT1Q86Y38 959 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 SIX6OS1Q8N1H7 587 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 MRPL43Q8N983 215 aaKnown RBP15.41■□□□□ 0.06
TNF-208ENST00000449264 GPR152Q8TDT2 470 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 RFFLQ8WZ73 363 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 VCPIP1Q96JH7 1222 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 HSFY1Q96LI6 401 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 KLHL5Q96PQ7 755 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 NUP85Q9BW27 656 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 CYP4F11Q9HBI6 524 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 NGRNQ9NPE2 291 aaKnown RBP15.41■□□□□ 0.06
TNF-208ENST00000449264 IRAK3Q9Y616 596 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 GOLGA6L9A6NEM1 432 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 BUB1O43683 1085 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 ABLIM3O94929 683 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 SEC24AO95486 1093 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 SPATA31D3P0C874 917 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 HAPLN1P10915 354 aaPredicted RBP15.41■□□□□ 0.06
TNF-208ENST00000449264 ATF2P15336 505 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 ACADSBP45954 432 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 NOP2P46087 812 aaKnown RBP15.41■□□□□ 0.06
TNF-208ENST00000449264 TKTL1P51854 596 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 SNX16P57768 344 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 FAM102AQ5T9C2 384 aaPredicted RBP15.41■□□□□ 0.06
TNF-208ENST00000449264 SPATA31D4Q6ZUB0 917 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 TMEM110Q86TL2 294 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 CLEC4CQ8WTT0 213 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 OSGEPQ9NPF4 335 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 SALL4Q9UJQ4 1053 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 PAXBP1Q9Y5B6 917 aa15.41■□□□□ 0.06
TNF-208ENST00000449264 ZNF638Q14966 1978 aaKnown RBP15.41■□□□□ 0.06
TNF-208ENST00000449264 GREB1Q4ZG55 1949 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 ESPNB1AK53 854 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 HHLA1C9JL84 531 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 PRRG1O14668 218 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 PAPSS1O43252 624 aaPredicted RBP15.4■□□□□ 0.06
TNF-208ENST00000449264 TGM5O43548 720 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 GABBR2O75899 941 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 CYP1A2P05177 515 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 ELF1P32519 619 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 GABRB2P47870 512 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 SLC5A3P53794 718 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 SCUBE3Q8IX30 993 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 SLC35G2Q8TBE7 412 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 ZNF564Q8TBZ8 553 aaPredicted RBP15.4■□□□□ 0.06
TNF-208ENST00000449264 KCTD13Q8WZ19 329 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 PIWIL1Q96J94 861 aaKnown RBP15.4■□□□□ 0.06
TNF-208ENST00000449264 SELENOOQ9BVL4 669 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 CYLDQ9NQC7 956 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 AVENQ9NQS1 362 aaPredicted RBP15.4■□□□□ 0.06
TNF-208ENST00000449264 METTL5Q9NRN9 209 aaKnown RBP15.4■□□□□ 0.06
TNF-208ENST00000449264 KCND1Q9NSA2 647 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 SCINQ9Y6U3 715 aa15.4■□□□□ 0.06
TNF-208ENST00000449264 RFXAPO00287 272 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 MOCS3O95396 460 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 GLUD1P00367 558 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 RPL34P49207 117 aaKnown RBP15.39■□□□□ 0.05
TNF-208ENST00000449264 ZNF662Q6ZS27 426 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 RHOT2Q8IXI1 618 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 C3orf20Q8ND61 904 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 SCAMP5Q8TAC9 235 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 NDRG1Q92597 394 aaKnown RBP15.39■□□□□ 0.05
TNF-208ENST00000449264 C8orf48Q96LL4 319 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 MCEEQ96PE7 176 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 IRX2Q9BZI1 471 aaPredicted RBP15.39■□□□□ 0.05
TNF-208ENST00000449264 ULBP1Q9BZM6 244 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 PNPLA8Q9NP80 782 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 PARVAQ9NVD7 372 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 WDR35Q9P2L0 1181 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 COG5Q9UP83 839 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 COLQQ9Y215 455 aaPredicted RBP15.39■□□□□ 0.05
TNF-208ENST00000449264 YIPF1Q9Y548 306 aa15.39■□□□□ 0.05
TNF-208ENST00000449264 MTCL1Q9Y4B5 1905 aaKnown RBP15.39■□□□□ 0.05
TNF-208ENST00000449264 A0A0A6YYK5 440 aaPredicted RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 GRAP2O75791 330 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 USP17L7P0C7H9 530 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 ATF6P18850 670 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 TUFMP49411 452 aaKnown RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 RPL10AP62906 217 aaKnown RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 MAMLD1Q13495 774 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 ZNF268Q14587 947 aaPredicted RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 PLEKHA7Q6IQ23 1121 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 DCUN1D2Q6PH85 259 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 OLFML1Q6UWY5 402 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 GIPC2Q8TF65 315 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 C16orf45Q96MC5 204 aaPredicted RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 UBXN6Q9BZV1 441 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 MRPL47Q9HD33 250 aaKnown RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 UVRAGQ9P2Y5 699 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 CAPN6Q9Y6Q1 641 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 BTNL10A8MVZ5 291 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms