RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 BUB1O43683 1085 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 FBXO21O94952 628 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 MOCS3O95396 460 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 ATF2P15336 505 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 RPL17P18621 184 aaKnown RBP20.28■□□□□ 0.84
RPS28-202ENST00000449223 C11orf63Q6NUN7 778 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 LLGL2Q6P1M3 1020 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 FAM183BPQ6ZVS7 135 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 SLC26A9Q7LBE3 791 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 ATAD1Q8NBU5 361 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 FNIP1Q8TF40 1166 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 UBE2Q2Q8WVN8 375 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 CNGB3Q9NQW8 809 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 TLR9Q9NR96 1032 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 USP3Q9Y6I4 520 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 GREB1Q4ZG55 1949 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 GRID2IPA4D2P6 1211 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 FSCN2O14926 492 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 C1RP00736 705 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 HAPLN1P10915 354 aaPredicted RBP20.27■□□□□ 0.84
RPS28-202ENST00000449223 PBX2P40425 430 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 NOP2P46087 812 aaKnown RBP20.27■□□□□ 0.84
RPS28-202ENST00000449223 SLC6A3Q01959 620 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 ADCY1Q08828 1119 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 SPRED2Q7Z698 418 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 FEZF2Q8TBJ5 459 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 POF1BQ8WVV4 589 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 SPATA17Q96L03 361 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 CRISPLD1Q9H336 500 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 LRRC4Q9HBW1 653 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.84
RPS28-202ENST00000449223 NGRNQ9NPE2 291 aaKnown RBP20.27■□□□□ 0.84
RPS28-202ENST00000449223 CHORDC1Q9UHD1 332 aaPredicted RBP20.27■□□□□ 0.84
RPS28-202ENST00000449223 MSRAQ9UJ68 235 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 TMEM59LQ9UK28 342 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 PLXNA3P51805 1871 aa20.27■□□□□ 0.84
RPS28-202ENST00000449223 TRANK1O15050 2925 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 TMEM191CA6NGB0 347 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 H3BNC9 293 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 TEX28O15482 410 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 SART1O43290 800 aaKnown RBP20.27■□□□□ 0.83
RPS28-202ENST00000449223 KRT3P12035 628 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 GRIK1P39086 918 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 ARPP19P56211 112 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 ERVFC1P60507 584 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 GNG11P61952 73 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 ADIGQ0VDE8 80 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 CAMK1Q14012 370 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 SMC1AQ14683 1233 aaKnown RBP20.27■□□□□ 0.83
RPS28-202ENST00000449223 PM20D1Q6GTS8 502 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 PDE12Q6L8Q7 609 aaKnown RBP20.27■□□□□ 0.83
RPS28-202ENST00000449223 GPRIN1Q7Z2K8 1008 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 TMC7Q7Z402 723 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 SCUBE3Q8IX30 993 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 PGLYRP2Q96PD5 576 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 TCF25Q9BQ70 676 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 ASNSD1Q9NWL6 643 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 IL37Q9NZH6 218 aa20.27■□□□□ 0.83
RPS28-202ENST00000449223 BUB1BO60566 1050 aaPredicted RBP20.26■□□□□ 0.83
RPS28-202ENST00000449223 GLI1P08151 1106 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 CNPP09543 421 aaKnown RBP20.26■□□□□ 0.83
RPS28-202ENST00000449223 DNAJB1P25685 340 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 DNAJB2P25686 324 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 TUFMP49411 452 aaKnown RBP20.26■□□□□ 0.83
RPS28-202ENST00000449223 RPL7AP62424 266 aaKnown RBP20.26■□□□□ 0.83
RPS28-202ENST00000449223 ZNF569Q5MCW4 686 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 FAM102AQ5T9C2 384 aaPredicted RBP20.26■□□□□ 0.83
RPS28-202ENST00000449223 OR6B2Q6IFH4 312 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 SYCE1Q8N0S2 351 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 SIX6OS1Q8N1H7 587 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 MRPL43Q8N983 215 aaKnown RBP20.26■□□□□ 0.83
RPS28-202ENST00000449223 AUTS2Q8WXX7 1259 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 IRGQQ8WZA9 623 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 KHSRPQ92945 711 aaKnown RBP eCLIP20.26■□□□□ 0.83
RPS28-202ENST00000449223 PIWIL1Q96J94 861 aaKnown RBP20.26■□□□□ 0.83
RPS28-202ENST00000449223 WDR24Q96S15 920 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 SELENOOQ9BVL4 669 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 ANAPC7Q9UJX3 599 aa20.26■□□□□ 0.83
RPS28-202ENST00000449223 FAM92AA1XBS5 289 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 FANCGO15287 622 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 PALMO75781 387 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 LCP1P13796 627 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 TNNT1P13805 278 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 MAN1A1P33908 653 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 TKTL1P51854 596 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 SLC5A3P53794 718 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 NAP1L1P55209 391 aaKnown RBP20.25■□□□□ 0.83
RPS28-202ENST00000449223 RPL10AP62906 217 aaKnown RBP20.25■□□□□ 0.83
RPS28-202ENST00000449223 MRPS5P82675 430 aaKnown RBP20.25■□□□□ 0.83
RPS28-202ENST00000449223 DUSP4Q13115 394 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 SLC35F6Q8N357 371 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 TTC9BQ8N6N2 239 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 NIPA2Q8N8Q9 360 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 MCEEQ96PE7 176 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 ENTPD7Q9NQZ7 604 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 COMMD8Q9NX08 183 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 JRKLQ9Y4A0 524 aa20.25■□□□□ 0.83
RPS28-202ENST00000449223 ZNF638Q14966 1978 aaKnown RBP20.25■□□□□ 0.83
RPS28-202ENST00000449223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.24■□□□□ 0.83
RPS28-202ENST00000449223 C2orf71A6NGG8 1288 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms