RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ARCQ7LC44 396 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 TTC30AQ86WT1 665 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 SLC43A3Q8NBI5 491 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 B3GALNT2Q8NCR0 500 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 BBOF1Q8ND07 529 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 GSTCDQ8NEC7 633 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 CCHCR1Q8TD31 782 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 GDAP1L1Q96MZ0 367 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 FMO2Q99518 471 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 HNRNPABQ99729 332 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 ADAM2Q99965 735 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 TRIM51Q9BSJ1 452 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 DPH5Q9H2P9 285 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 TRMT13Q9NUP7 481 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 LRRD1A4D1F6 860 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 C2CD4BA6NLJ0 364 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 GABRDO14764 452 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 XPO1O14980 1071 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 EOMESO95936 686 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 PDGFRAP16234 1089 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 ECHS1P30084 290 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 RPL34P49207 117 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 VEGFBP49765 207 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 SLC25A11Q02978 314 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 CAV1Q03135 178 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 CALCOCO2Q13137 446 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 ZNF618Q5T7W0 954 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 DAB2IPQ5VWQ8 1189 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 LHX8Q68G74 356 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 PMF1Q6P1K2 205 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 METTL23Q86XA0 190 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 C1orf54Q8WWF1 131 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 SENP8Q96LD8 212 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 TSPYL1Q9H0U9 437 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 DPEP3Q9H4B8 488 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 RNF19AQ9NV58 838 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 DSEQ9UL01 958 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 hCG_1818297A0A087WSY0 165 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 A0A1W2PQ45 241 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 A0A1W2PQY0 241 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 GOLGA8KD6RF30 607 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 ARVCFO00192 962 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM153BP0C7A2 387 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 ODC1P11926 461 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 CKBP12277 381 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 PTPN1P18031 435 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 LMO2P25791 158 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 PCSK1P29120 753 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 ADORA2BP29275 332 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 SDC4P31431 198 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 RGS7P49802 495 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 SCNN1GP51170 649 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 KRT17Q04695 432 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 TUSC3Q13454 348 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 PTK6Q13882 451 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM153CQ494X1 144 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 EFHC1Q5JVL4 640 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 OLFML1Q6UWY5 402 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 MFSD7Q6UXD7 560 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 ZNF365Q70YC5 407 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 SLC26A9Q7LBE3 791 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 DDX42Q86XP3 938 aaKnown RBP eCLIP11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 EMC1Q8N766 993 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 CCDC89Q8N998 374 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 SLC2A14Q8TDB8 520 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 RXFP2Q8WXD0 754 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 LPPQ93052 612 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 CCDC114Q96M63 670 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 HEMGNQ9BXL5 484 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 FTHL17Q9BXU8 183 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 TRIM31Q9BZY9 425 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 ZWILCHQ9H900 591 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 DDX43Q9NXZ2 648 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 WHRNQ9P202 907 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM153AQ9UHL3 310 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 CDH9Q9ULB4 789 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 USP18Q9UMW8 372 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 PHF24Q9UPV7 400 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 NME7Q9Y5B8 376 aa11.08□□□□□ -0.64
VIPAS39-203ENST00000448935 MEIS3P2A8K0S8 358 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 PI4K2BG5E9Z4 385 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 INPPL1O15357 1258 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 PRPSAP2O60256 369 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 MGEA5O60502 916 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 TRUB2O95900 331 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 CCDC130P13994 396 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 ITIH2P19823 946 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 KDELR1P24390 212 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 MIPP30301 263 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 CDKN2BP42772 138 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 PTPN9P43378 593 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 CLCNKBP51801 687 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 SNX1Q13596 522 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 SLMAPQ14BN4 828 aa11.07□□□□□ -0.64
VIPAS39-203ENST00000448935 TRADDQ15628 312 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms