RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ANKRD36BP1Q96IX9 119 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CEP295NLQ96MC4 621 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 C2orf42Q9NWW7 574 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CGNQ9P2M7 1197 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 GTF3C4Q9UKN8 822 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CCL26Q9Y258 94 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 SNX9Q9Y5X1 595 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 ZNF233A6NK53 670 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 TMEM191BP0C7N4 346 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 ATP1A3P13637 1013 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 RPL13P26373 211 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 GPR15P49685 360 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 GALK1P51570 392 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 NR1H3Q13133 447 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 SNRNP35Q16560 246 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 DUOXA2Q1HG44 320 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 TRIM68Q6AZZ1 485 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 FSTL4Q6MZW2 842 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 FAM171BQ6P995 826 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 FOXR2Q6PJQ5 311 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 C4orf50Q6ZRC1 276 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 FAM186BQ8IYM0 893 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 ADGRF2Q8IZF7 708 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 CCDC26Q8TAB7 109 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 GAB3Q8WWW8 586 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 CNOT6LQ96LI5 555 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 PKMYT1Q99640 499 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 KIAA1586Q9HCI6 787 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 PDE11AQ9HCR9 933 aa14.65□□□□□ -0.06
PDLIM2-213ENST00000448520 ACACBO00763 2458 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 TRAV19A0A0A6YYK7 116 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 OTOL1A6NHN0 477 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 BECN2A8MW95 431 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 IKBKBO14920 756 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 RPP40O75818 363 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 TNNC2P02585 160 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 TRIM49P0CI25 452 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 TRIM49CP0CI26 452 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 PFKLP17858 780 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 ACAT1P24752 427 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 MAGEA11P43364 429 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 PDE6CP51160 858 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 DLG4P78352 724 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 CYP24A1Q07973 514 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 MAPRE1Q15691 268 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 SOWAHAQ2M3V2 549 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 CCDC40Q4G0X9 1142 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 SDHAF4Q5VUM1 108 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 CDKAL1Q5VV42 579 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 LMBRD2Q68DH5 695 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 VSTM1Q6UX27 236 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 CPA6Q8N4T0 437 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 OSCP1Q8WVF1 389 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 CEP63Q96MT8 703 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 P2RY13Q9BPV8 354 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 THAP9Q9H5L6 903 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 ECT2Q9H8V3 914 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 INTS13Q9NVM9 706 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 DUS2Q9NX74 493 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 EHD2Q9NZN4 543 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 MAGEC2Q9UBF1 373 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 SIX4Q9UIU6 781 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 CDH9Q9ULB4 789 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 PTPRJQ12913 1337 aa14.64□□□□□ -0.07
PDLIM2-213ENST00000448520 GREB1Q4ZG55 1949 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 ANAPC1Q9H1A4 1944 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 SMTNL1A8MU46 457 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 KCNJ18B7U540 433 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 AXIN1O15169 862 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 EGFP01133 1207 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 FAM163BP0C2L3 166 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 ZNF806P0C7X5 589 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 EPB41P11171 864 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 ARSAP15289 507 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 TCF3P15923 654 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 ZNF18P17022 549 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 GJA4P35212 333 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 PSMC2P35998 433 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 KCNJ12Q14500 433 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 MTF1Q14872 753 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 C1orf220Q5T0J3 134 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 SCARA3Q6AZY7 606 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 LIMS2Q7Z4I7 341 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 FILIP1Q7Z7B0 1213 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 OSTM1Q86WC4 334 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 SCN4BQ8IWT1 228 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 ATP2A3Q93084 1043 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 CCDC127Q96BQ5 260 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 HPDLQ96IR7 371 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 ZC3H10Q96K80 434 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 SPATA17Q96L03 361 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 ANP32EQ9BTT0 268 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 MTMR12Q9C0I1 747 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 TAB2Q9NYJ8 693 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 FRMD4BQ9Y2L6 1034 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 PCDHGA5Q9Y5G8 931 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 OBSL1O75147 1896 aa14.63□□□□□ -0.07
PDLIM2-213ENST00000448520 SLC16A3O15427 465 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms