RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 RAP1GAPP47736 663 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 CDH8P55286 799 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 BIRC3Q13489 604 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 TDRD10Q5VZ19 366 aaKnown RBP30.11■■■□□ 2.41
CBX4-202ENST00000448310 CEP57L1Q8IYX8 460 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 CAMKK1Q8N5S9 505 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 SYAP1Q96A49 352 aaPredicted RBP30.11■■■□□ 2.41
CBX4-202ENST00000448310 CPQQ9Y646 472 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 ANTXRLA6NF34 631 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 PFKLP17858 780 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 ATICP31939 592 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 DMC1Q14565 340 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 SF3A2Q15428 464 aaKnown RBP30.1■■■□□ 2.41
CBX4-202ENST00000448310 SCARA5Q6ZMJ2 495 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 SYT13Q7L8C5 426 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 FILIP1Q7Z7B0 1213 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 MYH10P35580 1976 aa30.1■■■□□ 2.41
CBX4-202ENST00000448310 LRRIQ3A6PVS8 624 aaPredicted RBP30.09■■■□□ 2.41
CBX4-202ENST00000448310 OPRD1P41143 372 aa30.09■■■□□ 2.41
CBX4-202ENST00000448310 SLC7A9P82251 487 aa30.09■■■□□ 2.41
CBX4-202ENST00000448310 STK4Q13043 487 aa30.09■■■□□ 2.41
CBX4-202ENST00000448310 GAB4Q2WGN9 574 aa30.09■■■□□ 2.41
CBX4-202ENST00000448310 ZNF699Q32M78 642 aa30.09■■■□□ 2.41
CBX4-202ENST00000448310 KIAA0895Q8NCT3 520 aa30.09■■■□□ 2.41
CBX4-202ENST00000448310 ACTN4O43707 911 aaKnown RBP30.08■■■□□ 2.41
CBX4-202ENST00000448310 EPN2O95208 641 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 OLFM2O95897 454 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 OAS1P00973 400 aaKnown RBP30.08■■■□□ 2.41
CBX4-202ENST00000448310 PPP3CCP48454 512 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 SEC13P55735 322 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 PARD3BQ8TEW8 1205 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 ACDQ96AP0 544 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 SLITRK1Q96PX8 696 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 RCOR1Q9UKL0 485 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 CFAP45Q9UL16 551 aa30.08■■■□□ 2.41
CBX4-202ENST00000448310 CYP17A1P05093 508 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 SLFN14P0C7P3 912 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 PDIA4P13667 645 aaKnown RBP30.07■■■□□ 2.4
CBX4-202ENST00000448310 ATL3Q6DD88 541 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 GOLGA5Q8TBA6 731 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 PAGE5Q96GU1 130 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 LOXL4Q96JB6 756 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 KCNK16Q96T55 309 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 SDCBP2Q9H190 292 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 SMOC1Q9H4F8 434 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 EXOC1Q9NV70 894 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 CFAP97Q9P2B7 532 aa30.07■■■□□ 2.4
CBX4-202ENST00000448310 TPRP12270 2363 aaKnown RBP30.07■■■□□ 2.4
CBX4-202ENST00000448310 DCLK1O15075 740 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 AKAP3O75969 853 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 VNN1O95497 513 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 APBB3O95704 486 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 C4BPAP04003 597 aaKnown RBP30.06■■■□□ 2.4
CBX4-202ENST00000448310 MBL2P11226 248 aaPredicted RBP30.06■■■□□ 2.4
CBX4-202ENST00000448310 NCOA4Q13772 614 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 KMT5BQ4FZB7 885 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 AASDHQ4L235 1098 aaPredicted RBP30.06■■■□□ 2.4
CBX4-202ENST00000448310 C2orf27AQ580R0 203 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 ZNF667Q5HYK9 610 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 FAM35AQ86V20 835 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 NUP93Q8N1F7 819 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 MED10Q9BTT4 135 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 VRTNQ9H8Y1 702 aa30.06■■■□□ 2.4
CBX4-202ENST00000448310 CNOT1A5YKK6 2376 aaKnown RBP30.05■■■□□ 2.4
CBX4-202ENST00000448310 K7EQS6 105 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 YWHAQP27348 245 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 DLG4P78352 724 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 PLK5Q496M5 336 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 PPM1JQ5JR12 505 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 C12orf50Q8NA57 414 aaPredicted RBP30.05■■■□□ 2.4
CBX4-202ENST00000448310 USP33Q8TEY7 942 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 FBXO32Q969P5 355 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 RXFP3Q9NSD7 469 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 DMAC2Q9NW81 257 aa30.05■■■□□ 2.4
CBX4-202ENST00000448310 ABCA7Q8IZY2 2146 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 FOXD2O60548 495 aaPredicted RBP30.04■■■□□ 2.4
CBX4-202ENST00000448310 CLDN10P78369 228 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 DHCR24Q15392 516 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 PAQR9Q6ZVX9 377 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 ADGRG2Q8IZP9 1017 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 SCAMP5Q8TAC9 235 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 CHAMP1Q96JM3 812 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 ZC3H10Q96K80 434 aaKnown RBP30.04■■■□□ 2.4
CBX4-202ENST00000448310 KCTD10Q9H3F6 313 aa30.04■■■□□ 2.4
CBX4-202ENST00000448310 ATP8B3O60423 1300 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 A0A1B0GVL5 298 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 ZNF806P0C7X5 589 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 PFKFB1P16118 471 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 SLC6A11P48066 632 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 DGKEP52429 567 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 AP3M2P53677 418 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 ORC1Q13415 861 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 SFTPA1Q8IWL2 248 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 TSTD1Q8NFU3 115 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 CNTNAP3BQ96NU0 1288 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 CNTNAP3Q9BZ76 1288 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 DUSP15Q9H1R2 295 aaPredicted RBP30.03■■■□□ 2.4
CBX4-202ENST00000448310 CHORDC1Q9UHD1 332 aaPredicted RBP30.03■■■□□ 2.4
CBX4-202ENST00000448310 INVSQ9Y283 1065 aa30.03■■■□□ 2.4
CBX4-202ENST00000448310 RTN3O95197 1032 aaPredicted RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms