RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 LIN7AO14910 233 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PDE8AO60658 829 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 TCP10Q12799 353 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 KCNH2Q12809 1159 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ITGA9Q13797 1035 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 BNC2Q6ZN30 1099 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 DDX53Q86TM3 631 aaKnown RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 HDDC3Q8N4P3 179 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 MANSC1Q9H8J5 431 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 NOD2Q9HC29 1040 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 EFR3BQ9Y2G0 817 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 DMRT2Q9Y5R5 561 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 KPNA3O00505 521 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 POLR2EP19388 210 aaKnown RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 AP3M2P53677 418 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 MAD2L1Q13257 205 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ATPAF2Q8N5M1 289 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 EXO5Q9H790 373 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 GGA3Q9NZ52 723 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 CKLFQ9UBR5 152 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PNMA8BQ9ULN7 279 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PHF20L1A8MW92 1017 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 KCNN4O15554 427 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 NOS1APO75052 506 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 MAGEA6P43360 314 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 CASP5P51878 434 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 HPS6Q86YV9 775 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF615Q8N8J6 731 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 FAM81AQ8TBF8 368 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TTYH1Q9H313 450 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 CCSER2Q9H7U1 834 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF682O95780 498 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 LSP1P33241 339 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 PHKA2P46019 1235 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 GEMIN4P57678 1058 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 LRRC14Q15048 493 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 MAPK6Q16659 721 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 BMT2Q1RMZ1 405 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ZC2HC1CQ53FD0 456 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 INO80DQ53TQ3 878 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TCHHL1Q5QJ38 904 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 C11orf96Q7Z7L8 435 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 RNF26Q9BY78 433 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 WWOXQ9NZC7 414 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TBC1D30Q9Y2I9 924 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 SUPT7LO94864 414 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ITIH2P19823 946 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 MAGEA12P43365 314 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 MECP2P51608 486 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ITIH4Q14624 930 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ATG14Q6ZNE5 492 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 MREGQ8N565 214 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 LEMD2Q8NC56 503 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ARPC4-TTLL3A0A0A6YYG9 625 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TSPAN4O14817 238 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ATP9BO43861 1147 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 CCNE1P24864 410 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ZDHHC13Q8IUH4 622 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 RCOR2Q8IZ40 523 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TGFBRAP1Q8WUH2 860 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 PIH1D3Q9NQM4 214 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 SLC39A10Q9ULF5 831 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 INVSQ9Y283 1065 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 CITO14578 2027 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TDRD9Q8NDG6 1382 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 hCG_1642624A0A1W2PR95 340 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 REM1O75628 298 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 RHEBQ15382 184 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ZFP69Q49AA0 526 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 PGBD3Q8N328 593 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 SPATA5Q8NB90 893 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 OR52L1Q8NGH7 329 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 NACC2Q96BF6 587 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 UPB1Q9UBR1 384 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ANKRD65E5RJM6 399 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ZCCHC18P0CG32 403 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ADSLP30566 484 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 STIP1P31948 543 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 TWF1Q12792 350 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 Q3C1V9 767 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ATP6AP1LQ52LC2 224 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 PCDH19Q8TAB3 1148 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 MAFIPQ8WZ33 124 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 NLNQ9BYT8 704 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 PUS7LQ9H0K6 701 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 DHX35Q9H5Z1 703 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ELL3Q9HB65 397 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 SAE1Q9UBE0 346 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 PNMA3Q9UL41 463 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 C5orf51A6NDU8 294 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 CEBPGP53567 150 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 PPARAQ07869 468 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 VPS72Q15906 364 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 FAM76BQ5HYJ3 339 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 BTBD8Q5XKL5 378 aa9.22□□□□□ -0.93
NIPBL-202ENST00000448238 RBM43Q6ZSC3 357 aaKnown RBP9.22□□□□□ -0.93
NIPBL-202ENST00000448238 ERO1BQ86YB8 467 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms