RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 THAP9Q9H5L6 903 aa26.45■■□□□ 1.82
UFD1-204ENST00000447868 GCNT4Q9P109 453 aa26.45■■□□□ 1.82
UFD1-204ENST00000447868 HDCP19113 662 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 CD72P21854 359 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 PPP3CCP48454 512 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 HSP90AA4PQ58FG1 418 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 PHLDB3Q6NSJ2 640 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 RRAGAQ7L523 313 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 ARHGEF19Q8IW93 802 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 UBR7Q8N806 425 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 CSGALNACT1Q8TDX6 532 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 KIF9Q9HAQ2 790 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 THG1LQ9NWX6 298 aaKnown RBP26.44■■□□□ 1.82
UFD1-204ENST00000447868 PATJQ8NI35 1801 aa26.44■■□□□ 1.82
UFD1-204ENST00000447868 ZNF268Q14587 947 aaPredicted RBP26.43■■□□□ 1.82
UFD1-204ENST00000447868 ARHGAP29Q52LW3 1261 aa26.43■■□□□ 1.82
UFD1-204ENST00000447868 GPRIN1Q7Z2K8 1008 aa26.43■■□□□ 1.82
UFD1-204ENST00000447868 FAM114A1Q8IWE2 563 aa26.43■■□□□ 1.82
UFD1-204ENST00000447868 DUSP16Q9BY84 665 aa26.43■■□□□ 1.82
UFD1-204ENST00000447868 CHORDC1Q9UHD1 332 aaPredicted RBP26.43■■□□□ 1.82
UFD1-204ENST00000447868 PCDHB4Q9Y5E5 795 aa26.43■■□□□ 1.82
UFD1-204ENST00000447868 COL4A2P08572 1712 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 KANSL1LA0AUZ9 987 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 ARNTLO00327 626 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 CCDC183Q5T5S1 534 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 TMEM270Q6UE05 265 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 PDZD8Q8NEN9 1154 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 TTC8Q8TAM2 541 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 RIN3Q8TB24 985 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 CRACR2AQ9BSW2 395 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 TRPV5Q9NQA5 729 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 COMMD8Q9NX08 183 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 IL37Q9NZH6 218 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 GMIPQ9P107 970 aa26.42■■□□□ 1.82
UFD1-204ENST00000447868 HHLA1C9JL84 531 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 CD19P15391 556 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 PDE6CP51160 858 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 UBXN2BQ14CS0 331 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 ARHGAP17Q68EM7 881 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 SASS6Q6UVJ0 657 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 OVCA2Q8WZ82 227 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 DDX23Q9BUQ8 820 aaKnown RBP26.41■■□□□ 1.82
UFD1-204ENST00000447868 FBXO44Q9H4M3 255 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 SIT1Q9Y3P8 196 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 PIAS3Q9Y6X2 628 aa26.41■■□□□ 1.82
UFD1-204ENST00000447868 MYO16Q9Y6X6 1858 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 HELZP42694 1942 aaKnown RBP26.4■■□□□ 1.82
UFD1-204ENST00000447868 DCNP07585 359 aaKnown RBP26.4■■□□□ 1.82
UFD1-204ENST00000447868 ACO1P21399 889 aaKnown RBP26.4■■□□□ 1.82
UFD1-204ENST00000447868 KPNA1P52294 538 aaPredicted RBP26.4■■□□□ 1.82
UFD1-204ENST00000447868 PLCB2Q00722 1185 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 TNK2Q07912 1038 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 GOLGA7BQ2TAP0 167 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 SGO2Q562F6 1265 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 CT47A1Q5JQC4 288 aaPredicted RBP26.4■■□□□ 1.82
UFD1-204ENST00000447868 CC2D1AQ6P1N0 951 aaPredicted RBP26.4■■□□□ 1.82
UFD1-204ENST00000447868 PJA1Q8NG27 643 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 RNF38Q9H0F5 515 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 GKN1Q9NS71 199 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 GTSE1Q9NYZ3 720 aa26.4■■□□□ 1.82
UFD1-204ENST00000447868 MTF2Q9Y483 593 aaPredicted RBP26.4■■□□□ 1.82
UFD1-204ENST00000447868 OAS1P00973 400 aaKnown RBP26.39■■□□□ 1.82
UFD1-204ENST00000447868 PFKLP17858 780 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 GCNT1Q02742 428 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 ZNF77Q15935 545 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 ZNF852Q6ZMS4 543 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 PRSS33Q8NF86 280 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 SH3RF2Q8TEC5 729 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 KREMEN1Q96MU8 473 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 LTB4R2Q9NPC1 389 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 UBE2TQ9NPD8 197 aaPredicted RBP26.39■■□□□ 1.82
UFD1-204ENST00000447868 SAMSN1Q9NSI8 373 aaKnown RBP26.39■■□□□ 1.82
UFD1-204ENST00000447868 ARHGAP26Q9UNA1 814 aa26.39■■□□□ 1.82
UFD1-204ENST00000447868 KIF26AQ9ULI4 1882 aaPredicted RBP26.38■■□□□ 1.81
UFD1-204ENST00000447868 MIA3Q5JRA6 1907 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 FAM92AA1XBS5 289 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 FAM170BA6NMN3 283 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 RNF225M0QZC1 329 aaPredicted RBP26.38■■□□□ 1.81
UFD1-204ENST00000447868 PRKCSHP14314 528 aaPredicted RBP26.38■■□□□ 1.81
UFD1-204ENST00000447868 SLC9A1P19634 815 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 SOX9P48436 509 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 USP4Q13107 963 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 MTF1Q14872 753 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 MAN2A1Q16706 1144 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 TRIM68Q6AZZ1 485 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 GBP6Q6ZN66 633 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 ANKRD52Q8NB46 1076 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 KCNH6Q9H252 994 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 PNPLA8Q9NP80 782 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 SMPD4Q9NXE4 827 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 TSPAN16Q9UKR8 245 aa26.38■■□□□ 1.81
UFD1-204ENST00000447868 SHISA7A6NL88 538 aa26.37■■□□□ 1.81
UFD1-204ENST00000447868 KCNJ18B7U540 433 aa26.37■■□□□ 1.81
UFD1-204ENST00000447868 CYP26A1O43174 497 aa26.37■■□□□ 1.81
UFD1-204ENST00000447868 MBL2P11226 248 aaPredicted RBP26.37■■□□□ 1.81
UFD1-204ENST00000447868 VDRP11473 427 aa26.37■■□□□ 1.81
UFD1-204ENST00000447868 PGFP49763 221 aa26.37■■□□□ 1.81
UFD1-204ENST00000447868 SLC8A3P57103 927 aa26.37■■□□□ 1.81
UFD1-204ENST00000447868 APBA1Q02410 837 aa26.37■■□□□ 1.81
UFD1-204ENST00000447868 KCNJ12Q14500 433 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms