RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 SIX2Q9NPC8 291 aa21.7■■□□□ 1.06
PTX4-203ENST00000447419 GMIPQ9P107 970 aa21.7■■□□□ 1.06
PTX4-203ENST00000447419 TSPAN16Q9UKR8 245 aa21.7■■□□□ 1.06
PTX4-203ENST00000447419 COL4A3Q01955 1670 aa21.7■■□□□ 1.06
PTX4-203ENST00000447419 KRBA1A5PL33 1030 aa21.69■■□□□ 1.06
PTX4-203ENST00000447419 HHLA1C9JL84 531 aa21.69■■□□□ 1.06
PTX4-203ENST00000447419 PNMA6AP0CW24 399 aaPredicted RBP21.69■■□□□ 1.06
PTX4-203ENST00000447419 EEF1GP26641 437 aaKnown RBP21.69■■□□□ 1.06
PTX4-203ENST00000447419 NCAPHQ15003 741 aa21.69■■□□□ 1.06
PTX4-203ENST00000447419 FLCNQ8NFG4 579 aa21.69■■□□□ 1.06
PTX4-203ENST00000447419 USP13Q92995 863 aaPredicted RBP21.69■■□□□ 1.06
PTX4-203ENST00000447419 TRMT61BQ9BVS5 477 aaKnown RBP21.69■■□□□ 1.06
PTX4-203ENST00000447419 BRD9Q9H8M2 597 aa21.69■■□□□ 1.06
PTX4-203ENST00000447419 APEX2Q9UBZ4 518 aa21.69■■□□□ 1.06
PTX4-203ENST00000447419 PTPRDP23468 1912 aa21.69■■□□□ 1.06
PTX4-203ENST00000447419 ZNF840PA6NDX5 716 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 SCAMP3O14828 347 aaKnown RBP21.68■■□□□ 1.06
PTX4-203ENST00000447419 CYP26A1O43174 497 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 PSMC3P17980 439 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 KLK7P49862 253 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 KCNMA1Q12791 1236 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 SLITRK1Q96PX8 696 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 MFSD1Q9H3U5 465 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 TRPV4Q9HBA0 871 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 SMPD4Q9NXE4 827 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 RAPGEFL1Q9UHV5 662 aa21.68■■□□□ 1.06
PTX4-203ENST00000447419 TRAV19A0A0A6YYK7 116 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 PIK3R2O00459 728 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 STK25O00506 426 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 RTN3O95197 1032 aaPredicted RBP21.67■■□□□ 1.06
PTX4-203ENST00000447419 ATP1A3P13637 1013 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 HDCP19113 662 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 ARHGAP17Q68EM7 881 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 YAF2Q8IY57 180 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 LSM14BQ9BX40 385 aaKnown RBP21.67■■□□□ 1.06
PTX4-203ENST00000447419 RNF38Q9H0F5 515 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 HSD3B7Q9H2F3 369 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 TECTAO75443 2155 aa21.67■■□□□ 1.06
PTX4-203ENST00000447419 PRR33A8MZF0 331 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 O00370 1275 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 VDRP11473 427 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 CDK11BP21127 795 aaKnown RBP21.66■■□□□ 1.06
PTX4-203ENST00000447419 CD72P21854 359 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 MFAP3P55082 362 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 PDE4CQ08493 712 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 PIGZQ86VD9 579 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 MFSD6LQ8IWD5 586 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 DHX40Q8IX18 779 aaKnown RBP21.66■■□□□ 1.06
PTX4-203ENST00000447419 CEP295NLQ96MC4 621 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 FUCA2Q9BTY2 467 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 CCSER2Q9H7U1 834 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 SLC2A4RGQ9NR83 387 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 HEBP1Q9NRV9 189 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 TDP1Q9NUW8 608 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 EHD2Q9NZN4 543 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 DNAJC12Q9UKB3 198 aa21.66■■□□□ 1.06
PTX4-203ENST00000447419 FAM170AA1A519 330 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 GTPBP10A4D1E9 387 aaKnown RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 ZNF263O14978 683 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 DDX6P26196 483 aaKnown RBP eCLIP21.65■■□□□ 1.06
PTX4-203ENST00000447419 ZNF132P52740 706 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 TNK2Q07912 1038 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 ANKRD52Q8NB46 1076 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 NDRG1Q92597 394 aaKnown RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 NAT10Q9H0A0 1025 aaKnown RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 ARHGEF3Q9NR81 526 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 HESX1Q9UBX0 185 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 NUDT5Q9UKK9 219 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 BECN2A8MW95 431 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 M0QYV0 167 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 LETM1O95202 739 aaPredicted RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 PAEPP09466 180 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 RGS7P49802 495 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 ZNF165P49910 485 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 COPB1P53618 953 aaKnown RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 VCPP55072 806 aaKnown RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 ZXDBP98169 803 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 RAPGEF1Q13905 1077 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 ZSCAN23Q3MJ62 389 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 TRIM68Q6AZZ1 485 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 CELF5Q8N6W0 485 aaKnown RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 BPIFB1Q8TDL5 484 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 FAM124BQ9H5Z6 455 aaPredicted RBP21.65■■□□□ 1.06
PTX4-203ENST00000447419 OSER1Q9NX31 292 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 IL37Q9NZH6 218 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 WNT16Q9UBV4 365 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 FHOD1Q9Y613 1164 aa21.65■■□□□ 1.06
PTX4-203ENST00000447419 USP17L7P0C7H9 530 aa21.64■■□□□ 1.05
PTX4-203ENST00000447419 SLC44A4Q53GD3 710 aa21.64■■□□□ 1.05
PTX4-203ENST00000447419 DPY19L2P1Q6NXN4 242 aa21.64■■□□□ 1.05
PTX4-203ENST00000447419 SH3RF2Q8TEC5 729 aa21.64■■□□□ 1.05
PTX4-203ENST00000447419 DEPDC1BQ8WUY9 529 aa21.64■■□□□ 1.05
PTX4-203ENST00000447419 NMUR1Q9HB89 426 aa21.64■■□□□ 1.05
PTX4-203ENST00000447419 A0A1W2PQH9 124 aa21.63■■□□□ 1.05
PTX4-203ENST00000447419 COCHO43405 550 aa21.63■■□□□ 1.05
PTX4-203ENST00000447419 TBX18O95935 607 aa21.63■■□□□ 1.05
PTX4-203ENST00000447419 ZNF18P17022 549 aa21.63■■□□□ 1.05
PTX4-203ENST00000447419 PTMSP20962 102 aa21.63■■□□□ 1.05
PTX4-203ENST00000447419 RFX1P22670 979 aa21.63■■□□□ 1.05
PTX4-203ENST00000447419 SOX9P48436 509 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms