RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 RAB6CQ53S08 254 aa18.65■□□□□ 0.58
CLDN9-201ENST00000445369 OR6B2Q6IFH4 312 aa18.65■□□□□ 0.58
CLDN9-201ENST00000445369 ZNF467Q7Z7K2 595 aaPredicted RBP18.65■□□□□ 0.58
CLDN9-201ENST00000445369 ZNF410Q86VK4 478 aa18.65■□□□□ 0.58
CLDN9-201ENST00000445369 SPATA18Q8TC71 538 aa18.65■□□□□ 0.58
CLDN9-201ENST00000445369 L3MBTL3Q96JM7 780 aaPredicted RBP18.65■□□□□ 0.58
CLDN9-201ENST00000445369 RAB6CQ9H0N0 254 aa18.65■□□□□ 0.58
CLDN9-201ENST00000445369 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.65■□□□□ 0.58
CLDN9-201ENST00000445369 SMG5Q9UPR3 1016 aaKnown RBP18.65■□□□□ 0.58
CLDN9-201ENST00000445369 ARL2BPQ9Y2Y0 163 aa18.65■□□□□ 0.58
CLDN9-201ENST00000445369 SNAI1O95863 264 aaPredicted RBP18.64■□□□□ 0.57
CLDN9-201ENST00000445369 PDGFRAP16234 1089 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 KRT15P19012 456 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 PHBP35232 272 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 CDH6P55285 790 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 GEMIN4P57678 1058 aaKnown RBP18.64■□□□□ 0.57
CLDN9-201ENST00000445369 DPYSL3Q14195 570 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 MTFR1Q15390 333 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 STILQ15468 1287 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 C15orf59Q2T9L4 293 aaPredicted RBP18.64■□□□□ 0.57
CLDN9-201ENST00000445369 GOLGA7BQ2TAP0 167 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 CYB5D1Q6P9G0 228 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 FAM71DQ8N9W8 422 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 PYROXD1Q8WU10 500 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 PDCD11Q14690 1871 aaKnown RBP18.64■□□□□ 0.57
CLDN9-201ENST00000445369 PIK3R2O00459 728 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
CLDN9-201ENST00000445369 SSTR1P30872 391 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 GALNTL6Q49A17 601 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 PKDCCQ504Y2 493 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 ICE2Q659A1 982 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 C12orf29Q8N999 325 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 SMC6Q96SB8 1091 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 PLCD4Q9BRC7 762 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 DHRS4Q9BTZ2 278 aa18.64■□□□□ 0.57
CLDN9-201ENST00000445369 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.63■□□□□ 0.57
CLDN9-201ENST00000445369 DPYSL4O14531 572 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 UBOX5O94941 541 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 ROR1Q01973 937 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 DCAF4L1Q3SXM0 396 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 NPNTQ6UXI9 565 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 FBXO36Q8NEA4 188 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 CXCL16Q9H2A7 254 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 ACSS3Q9H6R3 686 aa18.63■□□□□ 0.57
CLDN9-201ENST00000445369 XPO7Q9UIA9 1087 aaKnown RBP18.63■□□□□ 0.57
CLDN9-201ENST00000445369 TYROBPO43914 113 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 MMP3P08254 477 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 EFTUD2Q15029 972 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 FAM133BQ5BKY9 247 aaKnown RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 FAM47CQ5HY64 1035 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 PPP1R26Q5T8A7 1209 aaPredicted RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 OLFML1Q6UWY5 402 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 RGS9BPQ6ZS82 235 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 C4orf33Q8N1A6 199 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 GRAMD1AQ96CP6 724 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 MAK16Q9BXY0 300 aaKnown RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 DERAQ9Y315 318 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 PRPSAP2O60256 369 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 GRAP2O75791 330 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 TSHRP16473 764 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 STIP1P31948 543 aaKnown RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 NRLP54845 237 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 BASP1P80723 227 aaKnown RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 RNASELQ05823 741 aaKnown RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 TFDP2Q14188 446 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 SPARCL1Q14515 664 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 CDO1Q16878 200 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 CCDC14Q49A88 953 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 TTC30AQ86WT1 665 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 PDIK1LQ8N165 341 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 TAB3Q8N5C8 712 aaPredicted RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 SLC10A4Q96EP9 437 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 MRPL45Q9BRJ2 306 aaKnown RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 PLEKHA5Q9HAU0 1116 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 SSU72Q9NP77 194 aaKnown RBP18.62■□□□□ 0.57
CLDN9-201ENST00000445369 NME7Q9Y5B8 376 aa18.62■□□□□ 0.57
CLDN9-201ENST00000445369 A0A1W2PPM1 405 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 PDHXO00330 501 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 STRNO43815 780 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 NPTXRO95502 500 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 SMPD1P17405 629 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 RGS7P49802 495 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 ACVR2BQ13705 512 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 KLHL38Q2WGJ6 581 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 PMF1Q6P1K2 205 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 DARS2Q6PI48 645 aaKnown RBP18.61■□□□□ 0.57
CLDN9-201ENST00000445369 ADGRD1Q6QNK2 874 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 C3orf62Q6ZUJ4 267 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 GBP7Q8N8V2 638 aaPredicted RBP18.61■□□□□ 0.57
CLDN9-201ENST00000445369 USP6NLQ92738 828 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 MRRFQ96E11 262 aaKnown RBP18.61■□□□□ 0.57
CLDN9-201ENST00000445369 SNX27Q96L92 541 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 ZMAT2Q96NC0 199 aaKnown RBP18.61■□□□□ 0.57
CLDN9-201ENST00000445369 RNF157Q96PX1 679 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 PAIP2Q9BPZ3 127 aaKnown RBP18.61■□□□□ 0.57
CLDN9-201ENST00000445369 SLC4A5Q9BY07 1137 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 GGT7Q9UJ14 662 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 GRID1Q9ULK0 1009 aa18.61■□□□□ 0.57
CLDN9-201ENST00000445369 SLC45A1Q9Y2W3 748 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms