RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 EEF2KMTQ96G04 330 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 KCNK16Q96T55 309 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 NIF3L1Q9GZT8 377 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 ECT2Q9H8V3 914 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 KRT82Q9NSB4 513 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 TMEM30AQ9NV96 361 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 COMMD8Q9NX08 183 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 PCDHA5Q9Y5H7 936 aa18.46■□□□□ 0.55
PDCD4-203ENST00000444997 TRDMT1O14717 391 aaKnown RBP18.45■□□□□ 0.54
PDCD4-203ENST00000444997 CCDC130P13994 396 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 SLC7A9P82251 487 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 FKBP3Q00688 224 aaKnown RBP18.45■□□□□ 0.54
PDCD4-203ENST00000444997 ORC1Q13415 861 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 CCINQ13939 588 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 PAQR9Q6ZVX9 377 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 FUKQ8N0W3 1084 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 RIN3Q8TB24 985 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 SLC2A14Q8TDB8 520 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 NELL1Q92832 810 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 NT5C1AQ9BXI3 368 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 WNT6Q9Y6F9 365 aa18.45■□□□□ 0.54
PDCD4-203ENST00000444997 OTOL1A6NHN0 477 aaPredicted RBP18.44■□□□□ 0.54
PDCD4-203ENST00000444997 LEFTY2O00292 366 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 SLC16A3O15427 465 aaKnown RBP18.44■□□□□ 0.54
PDCD4-203ENST00000444997 ATG13O75143 517 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 NFATC1O95644 943 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 FAM200BP0CF97 657 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 PPP1R2P41236 205 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 MXI1P50539 228 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 SLC5A3P53794 718 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 SATB1Q01826 763 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 INCA1Q0VD86 236 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 GAS6Q14393 721 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 TMEM196Q5HYL7 178 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 WDR44Q5JSH3 913 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 TCERG1LQ5VWI1 586 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 Q6ZS52 159 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 DDX42Q86XP3 938 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDCD4-203ENST00000444997 ELOA2Q8IYF1 753 aaPredicted RBP18.44■□□□□ 0.54
PDCD4-203ENST00000444997 TTC39CQ8N584 583 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 KIAA1958Q8N8K9 716 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 FBXL13Q8NEE6 735 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 SPATA20Q8TB22 786 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 RUBCNQ92622 972 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 SECISBP2LQ93073 1101 aaKnown RBP18.44■□□□□ 0.54
PDCD4-203ENST00000444997 FAXDC2Q96IV6 333 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 P2RY13Q9BPV8 354 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 RNF38Q9H0F5 515 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 FBXO44Q9H4M3 255 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 APOBEC3GQ9HC16 384 aaKnown RBP18.44■□□□□ 0.54
PDCD4-203ENST00000444997 FAM49BQ9NUQ9 324 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 HMGXB4Q9UGU5 601 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 CHORDC1Q9UHD1 332 aaPredicted RBP18.44■□□□□ 0.54
PDCD4-203ENST00000444997 CPQQ9Y646 472 aa18.44■□□□□ 0.54
PDCD4-203ENST00000444997 SLC9A3R1O14745 358 aaPredicted RBP18.43■□□□□ 0.54
PDCD4-203ENST00000444997 PSMA7O14818 248 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 OAS1P00973 400 aaKnown RBP18.43■□□□□ 0.54
PDCD4-203ENST00000444997 MBL2P11226 248 aaPredicted RBP18.43■□□□□ 0.54
PDCD4-203ENST00000444997 CD58P19256 250 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 DRD1P21728 446 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 ADORA2BP29275 332 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 GJA4P35212 333 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 GALK1P51570 392 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 MAP3K7CLP57077 242 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 LRRC63Q05C16 580 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 EML3Q32P44 896 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 DCAF17Q5H9S7 520 aaPredicted RBP18.43■□□□□ 0.54
PDCD4-203ENST00000444997 HECTD3Q5T447 861 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 ANKRD40Q6AI12 368 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 C12orf29Q8N999 325 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 SCAMP5Q8TAC9 235 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 ERCC4Q92889 916 aaPredicted RBP18.43■□□□□ 0.54
PDCD4-203ENST00000444997 HNRNPABQ99729 332 aaKnown RBP18.43■□□□□ 0.54
PDCD4-203ENST00000444997 LINC00597Q9H2U6 94 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 CSNK1G1Q9HCP0 422 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 RAB20Q9NX57 234 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 SMPD4Q9NXE4 827 aa18.43■□□□□ 0.54
PDCD4-203ENST00000444997 F5P12259 2224 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 PATJQ8NI35 1801 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 TNFRSF10BO14763 440 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 LILRB5O75023 590 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 PAPSS2O95340 614 aaPredicted RBP18.42■□□□□ 0.54
PDCD4-203ENST00000444997 OLFM2O95897 454 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 TDGF1P13385 188 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 MCCD1P59942 119 aaPredicted RBP18.42■□□□□ 0.54
PDCD4-203ENST00000444997 FBXO43Q4G163 708 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 FSTL4Q6MZW2 842 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 SUMF1Q8NBK3 374 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 CD101Q93033 1021 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 CYFIP2Q96F07 1278 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 DHTKD1Q96HY7 919 aaPredicted RBP18.42■□□□□ 0.54
PDCD4-203ENST00000444997 SMOQ99835 787 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 NACA2Q9H009 215 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 EPC1Q9H2F5 836 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 IL37Q9NZH6 218 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 NCDNQ9UBB6 729 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 RAB23Q9ULC3 237 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 CIZ1Q9ULV3 898 aaPredicted RBP18.42■□□□□ 0.54
PDCD4-203ENST00000444997 CACNA1IQ9P0X4 2223 aa18.42■□□□□ 0.54
PDCD4-203ENST00000444997 CILPO75339 1184 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms