RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 MUC6Q6W4X9 2439 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 FAM170BA6NMN3 283 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 GOLGA6L22H0YM25 854 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 NCAM2O15394 837 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 DCNP07585 359 aaKnown RBP19.73■□□□□ 0.75
CCDC188-202ENST00000444532 CD72P21854 359 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 TBXAS1P24557 533 aaPredicted RBP19.73■□□□□ 0.75
CCDC188-202ENST00000444532 ADORA2BP29275 332 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 SLC5A3P53794 718 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 MAP3K7CLP57077 242 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 KCNH2Q12809 1159 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 CUL2Q13617 745 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 UBXN2BQ14CS0 331 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 C1orf228Q6PIY5 440 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 ARL14EPQ8N8R7 260 aaPredicted RBP19.73■□□□□ 0.75
CCDC188-202ENST00000444532 ZMIZ2Q8NF64 920 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 FBXO32Q969P5 355 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 HEXIM2Q96MH2 286 aaKnown RBP19.73■□□□□ 0.75
CCDC188-202ENST00000444532 SLC22A12Q96S37 553 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 ARID3AQ99856 593 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 C8orf33Q9H7E9 229 aaPredicted RBP19.73■□□□□ 0.75
CCDC188-202ENST00000444532 GKN1Q9NS71 199 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 DLGAP2Q9P1A6 1054 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.73■□□□□ 0.75
CCDC188-202ENST00000444532 PIAS3Q9Y6X2 628 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 WDFY4Q6ZS81 3184 aa19.73■□□□□ 0.75
CCDC188-202ENST00000444532 HELZP42694 1942 aaKnown RBP19.72■□□□□ 0.75
CCDC188-202ENST00000444532 COL4A3Q01955 1670 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 FAM92AA1XBS5 289 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 SHISA7A6NL88 538 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 BEST1O76090 585 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 TCF3P15923 654 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 RAD23BP54727 409 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 IFRD2Q12894 506 aaPredicted RBP19.72■□□□□ 0.75
CCDC188-202ENST00000444532 ZNF394Q53GI3 561 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 CC2D1AQ6P1N0 951 aaPredicted RBP19.72■□□□□ 0.75
CCDC188-202ENST00000444532 SLC4A11Q8NBS3 891 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 SCAMP5Q8TAC9 235 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 ZFYVE19Q96K21 471 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 FAM83CQ9BQN1 747 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 FBXO44Q9H4M3 255 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 PNPLA8Q9NP80 782 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 ARHGAP26Q9UNA1 814 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 MTF2Q9Y483 593 aaPredicted RBP19.72■□□□□ 0.75
CCDC188-202ENST00000444532 PATJQ8NI35 1801 aa19.72■□□□□ 0.75
CCDC188-202ENST00000444532 ABL1P00519 1130 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 AFPP02771 609 aaKnown RBP19.71■□□□□ 0.75
CCDC188-202ENST00000444532 MAGEA9P43362 315 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 KPNA1P52294 538 aaPredicted RBP19.71■□□□□ 0.75
CCDC188-202ENST00000444532 NHLH1Q02575 133 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 PPP1R26Q5T8A7 1209 aaPredicted RBP19.71■□□□□ 0.75
CCDC188-202ENST00000444532 SNX30Q5VWJ9 437 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 CLEC20AQ6ZU45 233 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 RALGPS2Q86X27 583 aaPredicted RBP19.71■□□□□ 0.75
CCDC188-202ENST00000444532 FAM3CQ92520 227 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 CLDN23Q96B33 292 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 NT5C1BQ96P26 610 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 MED15Q96RN5 788 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 DUSP16Q9BY84 665 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 DACH1Q9UI36 760 aa19.71■□□□□ 0.75
CCDC188-202ENST00000444532 OAS1P00973 400 aaKnown RBP19.7■□□□□ 0.74
CCDC188-202ENST00000444532 TARSP26639 723 aaKnown RBP19.7■□□□□ 0.74
CCDC188-202ENST00000444532 RPS9P46781 194 aaKnown RBP19.7■□□□□ 0.74
CCDC188-202ENST00000444532 SLC7A9P82251 487 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 LRMPQ12912 555 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 PDGFRLQ15198 375 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 ZNF77Q15935 545 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 ITPRIPL2Q3MIP1 535 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 ARHGAP17Q68EM7 881 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 EHBP1Q8NDI1 1231 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 LMO3Q8TAP4 145 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 RNF38Q9H0F5 515 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 GTSE1Q9NYZ3 720 aa19.7■□□□□ 0.74
CCDC188-202ENST00000444532 CHORDC1Q9UHD1 332 aaPredicted RBP19.7■□□□□ 0.74
CCDC188-202ENST00000444532 HHLA1C9JL84 531 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 OLFM2O95897 454 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 ERCC5P28715 1186 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-202ENST00000444532 USP4Q13107 963 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 RUNX3Q13761 415 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 MTF1Q14872 753 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 TPD52L1Q16890 204 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-202ENST00000444532 CT47A1Q5JQC4 288 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-202ENST00000444532 UBR7Q8N806 425 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 KIAA1958Q8N8K9 716 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 RIN3Q8TB24 985 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 SH3RF2Q8TEC5 729 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 KIAA1257Q9ULG3 409 aa19.69■□□□□ 0.74
CCDC188-202ENST00000444532 SPECC1L-ADORA2AF8WAN1 911 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 H0Y858 1186 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 ZDHHC11BP0C7U3 371 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 TUBP50607 506 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 TNK2Q07912 1038 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 FZD5Q13467 585 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 ANGPT1Q15389 498 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 DPCR1Q3MIW9 517 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 HECTD3Q5T447 861 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 CREBRFQ8IUR6 639 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 ZNF687Q8N1G0 1237 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 PPM1KQ8N3J5 372 aa19.68■□□□□ 0.74
CCDC188-202ENST00000444532 GPT2Q8TD30 523 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms