RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 LY6KQ17RY6 165 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 ANO6Q4KMQ2 910 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 PAPD7Q5XG87 772 aaKnown RBP5.6□□□□□ -1.51
VPS50-206ENST00000443443 B3GNT9Q6UX72 402 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 NPNTQ6UXI9 565 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 Q6ZWC4 215 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 EPM2AIP1Q7L775 607 aaPredicted RBP5.6□□□□□ -1.51
VPS50-206ENST00000443443 CAND1Q86VP6 1230 aaKnown RBP5.6□□□□□ -1.51
VPS50-206ENST00000443443 CYP2W1Q8TAV3 490 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 KBTBD7Q8WVZ9 684 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 TAAR9Q96RI9 348 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 PAGR1Q9BTK6 254 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 CDH19Q9H159 772 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 ANLNQ9NQW6 1124 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 TISP43B9A030 160 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 AP4M1O00189 453 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 FGAP02671 866 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 CSF1RP07333 972 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 SLC7A1P30825 629 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 NFE2Q16621 373 aaPredicted RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 ZIK1Q3SY52 487 aaPredicted RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 CEP78Q5JTW2 689 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 ZNF626Q68DY1 528 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 TRIM72Q6ZMU5 477 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 FAM43BQ6ZT52 329 aaPredicted RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 YTHDF3Q7Z739 585 aaKnown RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 GLCCI1Q86VQ1 547 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 RAVER1Q8IY67 606 aaKnown RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 IZUMO1Q8IYV9 350 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 ABRAQ8N0Z2 381 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 PDILTQ8N807 584 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 BPIFB1Q8TDL5 484 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 TMEM171Q8WVE6 324 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 DAZAP1Q96EP5 407 aaKnown RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 ARPC5LQ9BPX5 153 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 FSD1LQ9BXM9 530 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 QTRT1Q9BXR0 403 aaKnown RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 TRIM54Q9BYV2 358 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 SEMA4CQ9C0C4 833 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 ZHX3Q9H4I2 956 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 ARNT2Q9HBZ2 717 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 GBA2Q9HCG7 927 aaPredicted RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 MAP3K20Q9NYL2 800 aaKnown RBP5.59□□□□□ -1.51
VPS50-206ENST00000443443 TFCP2L1Q9NZI6 479 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 SCINQ9Y6U3 715 aa5.59□□□□□ -1.51
VPS50-206ENST00000443443 ZNF804BA4D1E1 1349 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 A0A087WWL8 130 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 TMEM233B4DJY2 109 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 PPP6CO00743 305 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 ERC2O15083 957 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 PHGDHO43175 533 aaKnown RBP5.58□□□□□ -1.52
VPS50-206ENST00000443443 RFPL1O75677 317 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 VNN1O95497 513 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 KCNA3P22001 575 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 EPHB2P29323 1055 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 RAB32Q13637 225 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 LRCH2Q5VUJ6 765 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 SERPINA13PQ6UXR4 307 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 ZNF66Q6ZN08 573 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 CHSY1Q86X52 802 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 GAS2L3Q86XJ1 694 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 COL23A1Q86Y22 540 aaPredicted RBP5.58□□□□□ -1.52
VPS50-206ENST00000443443 SPARTQ8N0X7 666 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 SCARB1Q8WTV0 552 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 SOCS4Q8WXH5 440 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 CAMKK2Q96RR4 588 aa5.58□□□□□ -1.52
VPS50-206ENST00000443443 ZNF70Q9UC06 446 aaPredicted RBP5.58□□□□□ -1.52
VPS50-206ENST00000443443 PSMD9O00233 223 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 TUSC2O75896 110 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 PRKCBP05771 671 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 ATF3P18847 181 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 CALRP27797 417 aaKnown RBP5.57□□□□□ -1.52
VPS50-206ENST00000443443 PRKAR1BP31321 381 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 AGFG1P52594 562 aaKnown RBP5.57□□□□□ -1.52
VPS50-206ENST00000443443 ARFIP2P53365 341 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 RAPGEF1Q13905 1077 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 MYBPC2Q14324 1141 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 PTCHD3Q3KNS1 767 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 SLC9A4Q6AI14 798 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 ZNF425Q6IV72 752 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 SLC18B1Q6NT16 456 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 DPY19L3Q6ZPD9 716 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 CNGA4Q8IV77 575 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 TERB1Q8NA31 727 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 ASB2Q96Q27 587 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 C17orf80Q9BSJ5 609 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 B3GNT5Q9BYG0 378 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 ZNF700Q9H0M5 742 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 BHMT2Q9H2M3 363 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 SACM1LQ9NTJ5 587 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 TBC1D30Q9Y2I9 924 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 SNX14Q9Y5W7 946 aa5.57□□□□□ -1.52
VPS50-206ENST00000443443 CFAP69A5D8W1 941 aa5.56□□□□□ -1.52
VPS50-206ENST00000443443 CAPN8A6NHC0 703 aa5.56□□□□□ -1.52
VPS50-206ENST00000443443 RGS10O43665 173 aa5.56□□□□□ -1.52
VPS50-206ENST00000443443 LATS1O95835 1130 aa5.56□□□□□ -1.52
VPS50-206ENST00000443443 PTMAP06454 111 aaKnown RBP5.56□□□□□ -1.52
VPS50-206ENST00000443443 U2AF1L5P0DN76 240 aaPredicted RBP5.56□□□□□ -1.52
VPS50-206ENST00000443443 CTGFP29279 349 aa5.56□□□□□ -1.52
VPS50-206ENST00000443443 COPB2P35606 906 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms