RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 KRT18P05783 430 aaKnown RBP15.4■□□□□ 0.06
HMGN1-208ENST00000443046 CD59P13987 128 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 UBA7P41226 1012 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 GRIA2P42262 883 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 KCNA1Q09470 495 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 ZNF423Q2M1K9 1284 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 EOGTQ5NDL2 527 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 DENND5BQ6ZUT9 1274 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 DPH6Q7L8W6 267 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 TTC30AQ86WT1 665 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 ADGRF2Q8IZF7 708 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 CHCHD4Q8N4Q1 142 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 CSGALNACT2Q8N6G5 542 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 KBTBD7Q8WVZ9 684 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 HMGB4Q8WW32 186 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 FAM84AQ96KN4 292 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 KIF2CQ99661 725 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 FAM213AQ9BRX8 229 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 ZHX3Q9H4I2 956 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 CRTAC1Q9NQ79 661 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 FSCN3Q9NQT6 498 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 TRPM5Q9NZQ8 1165 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 SNX9Q9Y5X1 595 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 PLXNB3Q9ULL4 1909 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 ACACAQ13085 2346 aa15.4■□□□□ 0.06
HMGN1-208ENST00000443046 ATXN2Q99700 1313 aaKnown RBP15.4■□□□□ 0.06
HMGN1-208ENST00000443046 SLC9A3R1O14745 358 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 OAS1P00973 400 aaKnown RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 APODP05090 189 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 LMO2P25791 158 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 DDIT3P35638 169 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 PPP3CCP48454 512 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 NOP14P78316 857 aaKnown RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 RBP5P82980 135 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 HNRNPDQ14103 355 aaKnown RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 HDDC3Q8N4P3 179 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 KCNV2Q8TDN2 545 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 LARP4BQ92615 738 aaKnown RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 ASH1LQ9NR48 2969 aaKnown RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 DNAAF2Q9NVR5 837 aaKnown RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 BCCIPQ9P287 314 aaKnown RBP eCLIP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 MAGEC2Q9UBF1 373 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-208ENST00000443046 HCN2Q9UL51 889 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 CDH9Q9ULB4 789 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 CPQQ9Y646 472 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 APC2O95996 2303 aa15.39■□□□□ 0.05
HMGN1-208ENST00000443046 TCRBV21S2A2A0A5A6 115 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 ARHGAP33O14559 1287 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 AP5Z1O43299 807 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 EIF5BO60841 1220 aaKnown RBP15.38■□□□□ 0.05
HMGN1-208ENST00000443046 OPHN1O60890 802 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 GJB3O75712 270 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 CFIP05156 583 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 BDNFP23560 247 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 RDXP35241 583 aaKnown RBP15.38■□□□□ 0.05
HMGN1-208ENST00000443046 GRIN1Q05586 938 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 GFPT1Q06210 699 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-208ENST00000443046 RESTQ13127 1097 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 SOWAHCQ53LP3 525 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-208ENST00000443046 MCTP1Q6DN14 999 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 SFR1Q86XK3 245 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 ETFBKMTQ8IXQ9 262 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 MINDY1Q8N5J2 469 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 MYLPFQ96A32 169 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 SAAL1Q96ER3 474 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 SYT15Q9BQS2 421 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 CD248Q9HCU0 757 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 ZDHHC4Q9NPG8 344 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 ARHGEF4Q9NR80 690 aa15.38■□□□□ 0.05
HMGN1-208ENST00000443046 RBAKQ9NYW8 714 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-208ENST00000443046 FLNBO75369 2602 aaKnown RBP15.38■□□□□ 0.05
HMGN1-208ENST00000443046 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 ADH1CP00326 375 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 LDHAP00338 332 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 ADH5P11766 374 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 GABRG2P18507 467 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 GARTP22102 1010 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 LONP1P36776 959 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 GRIK1P39086 918 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 PSMC1P62191 440 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 ZNF33AQ06730 810 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 SLC14A1Q13336 389 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 MAPRE1Q15691 268 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 L1TD1Q5T7N2 865 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 SLC36A4Q6YBV0 504 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 RABEPKQ7Z6M1 372 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 KRI1Q8N9T8 703 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 C8orf48Q96LL4 319 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 DUSP9Q99956 384 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 GTPBP2Q9BX10 602 aaKnown RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 PDE11AQ9HCR9 933 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 EHD2Q9NZN4 543 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 CFAP97Q9P2B7 532 aa15.37■□□□□ 0.05
HMGN1-208ENST00000443046 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-208ENST00000443046 E2F8A0AVK6 867 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 TRIM66O15016 1216 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 WARSP23381 471 aaKnown RBP15.36■□□□□ 0.05
HMGN1-208ENST00000443046 ATXN3P54252 364 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-208ENST00000443046 RPL6Q02878 288 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms