RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 RDH13Q8NBN7 331 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 C3orf58Q8NDZ4 430 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 ANKK1Q8NFD2 765 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 PGLYRP2Q96PD5 576 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 SLC12A9Q9BXP2 914 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 OSBPL2Q9H1P3 480 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 C1orf115Q9H7X2 142 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 PKDREJQ9NTG1 2253 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 FAM221AA4D161 298 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 SPDYE3A6NKU9 549 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 SYN3O14994 580 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 OXTRP30559 389 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 PTGER4P35408 488 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 QARSP47897 775 aaKnown RBP7.86□□□□□ -1.15
SSXP3-201ENST00000442971 DAB2P98082 770 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 NCBP1Q09161 790 aaKnown RBP7.86□□□□□ -1.15
SSXP3-201ENST00000442971 BNIP3Q12983 259 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 MTERF2Q49AM1 385 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 HSP90AB4PQ58FF6 505 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 CCDC178Q5BJE1 867 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 TXNDC8Q6A555 127 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 SDE2Q6IQ49 451 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 ZNF280DQ6N043 979 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 PACS2Q86VP3 889 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 MIB1Q86YT6 1006 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 SMAP1Q8IYB5 467 aaPredicted RBP7.86□□□□□ -1.15
SSXP3-201ENST00000442971 WDR36Q8NI36 951 aaKnown RBP7.86□□□□□ -1.15
SSXP3-201ENST00000442971 CEP89Q96ST8 783 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 ACE2Q9BYF1 805 aaPredicted RBP7.86□□□□□ -1.15
SSXP3-201ENST00000442971 ABCG4Q9H172 646 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 PCED1AQ9H1Q7 454 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 CXCL16Q9H2A7 254 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 ACSL6Q9UKU0 697 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 PCDHA6Q9UN73 950 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 SLC27A5Q9Y2P5 690 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 PCDHGA7Q9Y5G6 932 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 PCDHA8Q9Y5H6 950 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 ENTPD2Q9Y5L3 495 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 COL4A3BPQ9Y5P4 624 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 TGP01266 2768 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 CUBNO60494 3623 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 CROCCQ5TZA2 2017 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 MXRA5Q9NR99 2828 aa7.86□□□□□ -1.15
SSXP3-201ENST00000442971 TBC1D3BA6NDS4 549 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 TCP11X1B4DZS4 312 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 VILLO15195 856 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 GRID2O43424 1007 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 CYTH3O43739 400 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 SOAT2O75908 522 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 NPTXRO95502 500 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 LEPRP48357 1165 aaKnown RBP7.85□□□□□ -1.15
SSXP3-201ENST00000442971 TPMTP51580 245 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 RESTQ13127 1097 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 UPP1Q16831 310 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 NBEAL2Q6ZNJ1 2754 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 TMEM150AQ86TG1 271 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 ESR2Q92731 530 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 HDAC11Q96DB2 347 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 KIF1BPQ96EK5 621 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 NUP58Q9BVL2 599 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 TCEAL9Q9UHQ7 104 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 HCN2Q9UL51 889 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.85□□□□□ -1.15
SSXP3-201ENST00000442971 SAMM50Q9Y512 469 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 DIDO1Q9BTC0 2240 aaKnown RBP7.85□□□□□ -1.15
SSXP3-201ENST00000442971 MYOFQ9NZM1 2061 aa7.85□□□□□ -1.15
SSXP3-201ENST00000442971 SIGLEC6O43699 453 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 PRICKLE3O43900 615 aaPredicted RBP7.84□□□□□ -1.15
SSXP3-201ENST00000442971 CYP17A1P05093 508 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 ATP2B1P20020 1258 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 NMT1P30419 496 aaKnown RBP7.84□□□□□ -1.15
SSXP3-201ENST00000442971 ARRB1P49407 418 aaPredicted RBP7.84□□□□□ -1.15
SSXP3-201ENST00000442971 PCBP1Q15365 356 aaKnown RBP eCLIP7.84□□□□□ -1.15
SSXP3-201ENST00000442971 UBE2SQ16763 222 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 CENPPQ6IPU0 288 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 MFSD6Q6ZSS7 791 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 MON1AQ86VX9 555 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 IQCA1Q86XH1 822 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 CHPFQ8IZ52 775 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 PIBF1Q8WXW3 757 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 ARHGAP45Q92619 1136 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 ACOX2Q99424 681 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 SH2D3AQ9BRG2 576 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 SEMA6CQ9H3T2 930 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 C6orf106Q9H6K1 298 aaPredicted RBP7.84□□□□□ -1.15
SSXP3-201ENST00000442971 PSTPIP2Q9H939 334 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 SEL1LQ9UBV2 794 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 TP53TG5Q9Y2B4 290 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 RAD54BQ9Y620 910 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 TLN2Q9Y4G6 2542 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 OBSL1O75147 1896 aa7.84□□□□□ -1.15
SSXP3-201ENST00000442971 COL27A1Q8IZC6 1860 aaPredicted RBP7.84□□□□□ -1.15
SSXP3-201ENST00000442971 NUMA1Q14980 2115 aa7.83□□□□□ -1.16
SSXP3-201ENST00000442971 A0A1B0GVM2 712 aa7.83□□□□□ -1.16
SSXP3-201ENST00000442971 EFCAB7A8K855 629 aa7.83□□□□□ -1.16
SSXP3-201ENST00000442971 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.83□□□□□ -1.16
SSXP3-201ENST00000442971 PRSS44E7EML9 344 aa7.83□□□□□ -1.16
SSXP3-201ENST00000442971 TBX3O15119 743 aa7.83□□□□□ -1.16
SSXP3-201ENST00000442971 CENPBP07199 599 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms