RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 CEP41Q9BYV8 373 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 MAD1L1Q9Y6D9 718 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 TCRBV9S1A1TA0A576 114 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 HAUS5O94927 633 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 MIPP30301 263 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 ARFIP2P53365 341 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 CDH6P55285 790 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 VGLL4Q14135 290 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 HIPK4Q8NE63 616 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 NMUR2Q9GZQ4 415 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 ACAD9Q9H845 621 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 RAB6BQ9NRW1 208 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 GINS2Q9Y248 185 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 H3BRJ5 948 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 DCTN3O75935 186 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 TROVE2P10155 538 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 MROH9Q5TGP6 573 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 ANO7Q6IWH7 933 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 PDIK1LQ8N165 341 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 C12orf29Q8N999 325 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 FAF2Q96CS3 445 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 PEBP4Q96S96 227 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 ZCWPW1Q9H0M4 648 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 PORCNQ9H237 461 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 PPP2R3BQ9Y5P8 575 aa13.71□□□□□ -0.21
SLC48A1-201ENST00000442218 TRIM49D1C9J1S8 452 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 APRTP07741 180 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 INHBAP08476 426 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 AMPD1P23109 780 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 GRIA1P42261 906 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 PHKA2P46019 1235 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 ALDH18A1P54886 795 aaKnown RBP13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 ZC3H12AQ5D1E8 599 aaKnown RBP13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 ACSBG2Q5FVE4 666 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 GADL1Q6ZQY3 521 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 USP6NLQ92738 828 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 DCPSQ96C86 337 aaKnown RBP13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 PCDH9Q9HC56 1237 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 NGRNQ9NPE2 291 aaKnown RBP13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 SNCAIPQ9Y6H5 919 aa13.71□□□□□ -0.22
SLC48A1-201ENST00000442218 RLFQ13129 1914 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 M0QYV0 167 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 CAPN9O14815 690 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PRPF4O43172 522 aaKnown RBP eCLIP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 ZC3H11AO75152 810 aaKnown RBP eCLIP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 USP1O94782 785 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 ASS1P00966 412 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 KDELR1P24390 212 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 CLCN3P51790 818 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 ATXN1P54253 815 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 LMNB2Q03252 620 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PEX6Q13608 980 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 EML3Q32P44 896 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 CES4AQ5XG92 561 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 ARID3BQ8IVW6 561 aaPredicted RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PPIL6Q8IXY8 311 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 NRG4Q8WWG1 115 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 GRAMD1AQ96CP6 724 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 GPRASP2Q96D09 838 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 MINDY3Q9H8M7 445 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PDGFCQ9NRA1 345 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 DLGAP2Q9P1A6 1054 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SMG5Q9UPR3 1016 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PARP14Q460N5 1801 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 C3orf70A6NLC5 250 aaPredicted RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 KCNN4O15554 427 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SMNDC1O75940 238 aaKnown RBP eCLIP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 BAG2O95816 211 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 LINGO3P0C6S8 592 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 GNAZP19086 355 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 RFC5P40937 340 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PSEN1P49768 467 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 ACVR2BQ13705 512 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 THOC5Q13769 683 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 RNF220Q5VTB9 566 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 C16orf46Q6P387 395 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SLC35B2Q8TB61 432 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 TTC25Q96NG3 672 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SYT15Q9BQS2 421 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 TRIM55Q9BYV6 548 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SDCBP2Q9H190 292 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 CXCL16Q9H2A7 254 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms