RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ZNF200P98182 395 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 GRIK3Q13003 919 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 WASHC2DQ5SRD0 308 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 EEPD1Q7L9B9 569 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 ZC3H18Q86VM9 953 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 RFWD2Q8NHY2 731 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 KCNV2Q8TDN2 545 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 NUDCD1Q96RS6 583 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 RPF1Q9H9Y2 349 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 PTPRHQ9HD43 1115 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 RPL26L1Q9UNX3 145 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 EDNRBP24530 442 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 NRLP54845 237 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 KBTBD12Q3ZCT8 623 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 ANGEL2Q5VTE6 544 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 CDR2LQ86X02 465 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 PTPRN2Q92932 1015 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 NLRP4Q96MN2 994 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 ADPGKQ9BRR6 497 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 TUBB6Q9BUF5 446 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 KLHL33A6NCF5 533 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 SPAG6O75602 509 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 TPBGLP0DKB5 382 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 CXCL8P10145 99 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 PCK1P35558 622 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 CDH6P55285 790 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 YWHAGP61981 247 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 TAF11Q15544 211 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 DALRD3Q5D0E6 543 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 FAM102AQ5T9C2 384 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 IGDCC3Q8IVU1 814 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 SLC4A11Q8NBS3 891 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 SLC44A1Q8WWI5 657 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 MCRS1Q96EZ8 462 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 APOPT1Q96IL0 206 aa17.22■□□□□ 0.35
SEMA3B-207ENST00000441915 B4GALT5O43286 388 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 IL18RAPO95256 599 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 GM2AP17900 193 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 GNAZP19086 355 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 CCNHP51946 323 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 ARFIP2P53365 341 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 NOMO1Q15155 1222 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 LBX2Q6XYB7 198 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 CHSY1Q86X52 802 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 APOBEC3FQ8IUX4 373 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 ZNF668Q96K58 619 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 FAM111AQ96PZ2 611 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TLE6Q9H808 572 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 HEY2Q9UBP5 337 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 SIX4Q9UIU6 781 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TEX264Q9Y6I9 313 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 IGKV6-21A0A0C4DH24 114 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 M0QYV0 167 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 NOP56O00567 594 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 PEX10O60683 326 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 CCDC22O60826 627 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 MICAL2O94851 1124 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 HAUS5O94927 633 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 LUC7L3O95232 432 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 GABRB2P47870 512 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 INHBEP58166 350 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TFDP2Q14188 446 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TRIM50Q86XT4 487 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 FBXO41Q8TF61 875 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TTC17Q96AE7 1141 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TMEM176AQ96HP8 235 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 TWNKQ96RR1 684 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 SDCBP2Q9H190 292 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 FZD8Q9H461 694 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 KANSL3Q9P2N6 904 aa17.21■□□□□ 0.35
SEMA3B-207ENST00000441915 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 CFAP69A5D8W1 941 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 SOWAHBA6NEL2 793 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 TGDSO95455 350 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 DHRS4L1P0CG22 281 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 RXRBP28702 533 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ETV4P43268 484 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ZNF143P52747 638 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 SLC18A2Q05940 514 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 MMRN1Q13201 1228 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 FAM47CQ5HY64 1035 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 NPNTQ6UXI9 565 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 C1orf127Q8N9H9 656 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 SH3TC2Q8TF17 1288 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 FAF2Q96CS3 445 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 NAF1Q96HR8 494 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 SERAC1Q96JX3 654 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 DENND2DQ9H6A0 471 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms