RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 ATG2BQ96BY7 2078 aa12.38□□□□□ -0.43
UBE2D4-204ENST00000440899 CNOT1A5YKK6 2376 aaKnown RBP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 SLC9A3R1O14745 358 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 RTN3O95197 1032 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 OPRD1P41143 372 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 LIMK1P53667 647 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 CACNA2D1P54289 1103 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 SF3A2Q15428 464 aaKnown RBP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 ELF2Q15723 593 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 PLK5Q496M5 336 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 AASDHQ4L235 1098 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 PPM1JQ5JR12 505 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 DDX42Q86XP3 938 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 PDZD8Q8NEN9 1154 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 ZNF518BQ9C0D4 1074 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 TMEM30AQ9NV96 361 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 RCOR1Q9UKL0 485 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 CFAP45Q9UL16 551 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 CPQQ9Y646 472 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
UBE2D4-204ENST00000440899 SPAG17Q6Q759 2223 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 K7EQS6 105 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 CLDN5O00501 218 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 RHOBTB1O94844 696 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 OLFM2O95897 454 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 OAS1P00973 400 aaKnown RBP12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 ADRB1P08588 477 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 YWHAQP27348 245 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 CASP4P49662 377 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 CLDN10P78369 228 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 BIRC3Q13489 604 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 CCDC6Q16204 474 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 ZNF699Q32M78 642 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 ZNF667Q5HYK9 610 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 PLA2G2CQ5R387 149 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 IL31Q6EBC2 164 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 FILIP1Q7Z7B0 1213 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 GRAMD1CQ8IYS0 662 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 PLEKHO2Q8TD55 490 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 USP33Q8TEY7 942 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 TMEM174Q8WUU8 243 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 OVCA2Q8WZ82 227 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 FBXO32Q969P5 355 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 TNIP3Q96KP6 325 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 DUSP15Q9H1R2 295 aaPredicted RBP12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 SMPD4Q9NXE4 827 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 ANAPC1Q9H1A4 1944 aa12.36□□□□□ -0.43
UBE2D4-204ENST00000440899 CHD8Q9HCK8 2581 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 GREB1Q4ZG55 1949 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 KLRC4O43908 158 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 CYP17A1P05093 508 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 MBL2P11226 248 aaPredicted RBP12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 MPLP40238 635 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 DGKEP52429 567 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 CDH8P55286 799 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 MRPS21P82921 87 aaKnown RBP12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 IFRD2Q12894 506 aaPredicted RBP12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 STK4Q13043 487 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 NCOA4Q13772 614 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 DHCR24Q15392 516 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 GAB4Q2WGN9 574 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 USP39Q53GS9 565 aaKnown RBP12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 C2orf27AQ580R0 203 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 SLC9A9Q8IVB4 645 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 CNTNAP3BQ96NU0 1288 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 KCNK16Q96T55 309 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 PNKPQ96T60 521 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 CNTNAP3Q9BZ76 1288 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 SMYD3Q9H7B4 428 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 VPS45Q9NRW7 570 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 EXOC1Q9NV70 894 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 CFAP97Q9P2B7 532 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 TBC1D14Q9P2M4 693 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 MMP17Q9ULZ9 603 aa12.35□□□□□ -0.43
UBE2D4-204ENST00000440899 E2F8A0AVK6 867 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 LRRIQ3A6PVS8 624 aaPredicted RBP12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 PDXKO00764 312 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 TNFRSF10BO14763 440 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 TM4SF5O14894 197 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 DCLK1O15075 740 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 COCHO43405 550 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 CLSTN1O94985 981 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 ADH1CP00326 375 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms