RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PPP1R37O75864 691 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 NFATC1O95644 943 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CAVIN2O95810 425 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CPP00450 1065 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 NEFHP12036 1026 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 HMGA1P17096 107 aaKnown RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 ATF6P18850 670 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CSRP1P21291 193 aaKnown RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 TXLNAP40222 546 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 MRPS21P82921 87 aaKnown RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 DMWDQ09019 674 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 HNRNPDQ14103 355 aaKnown RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 E2F5Q15329 346 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 E4F1Q66K89 784 aaPredicted RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 FSTL4Q6MZW2 842 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 ZNF720Q7Z2F6 126 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 LIMS2Q7Z4I7 341 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 BRSK2Q8IWQ3 736 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 OR10T2Q8NGX3 314 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 OVCA2Q8WZ82 227 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CD101Q93033 1021 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CCDC97Q96F63 343 aaPredicted RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 FIZ1Q96SL8 496 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 SEPT5Q99719 369 aaPredicted RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 LSM14BQ9BX40 385 aaKnown RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 SLC46A2Q9BY10 475 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CLSTN2Q9H4D0 955 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 BLOC1S4Q9NUP1 217 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 EVLQ9UI08 416 aaPredicted RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CLIC4Q9Y696 253 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 NCANO14594 1321 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 ATP8B1O43520 1251 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 PEX14O75381 377 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 TADA3O75528 432 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 NFICP08651 508 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CMA1P23946 247 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 TNFSF9P41273 254 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 IFNAR2P48551 515 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 RBP5P82980 135 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 MYO1EQ12965 1108 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 INTS6LQ5JSJ4 861 aaKnown RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 DAB2IPQ5VWQ8 1189 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 ANKRD20A12PQ8NF67 263 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 OTUB2Q96DC9 234 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 PGLYRP2Q96PD5 576 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 ARGLU1Q9NWB6 273 aaPredicted RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 TBC1D7Q9P0N9 293 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 ARHGAP26Q9UNA1 814 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 MYO16Q9Y6X6 1858 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 SCN1AP35498 2009 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 DCDC2BA2VCK2 349 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 ALDH1A2O94788 518 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 IVLP07476 585 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 GJA1P17302 382 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 ZNF77Q15935 545 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 USP39Q53GS9 565 aaKnown RBP6.4□□□□□ -1.38
PTPRR-204ENST00000440835 STPG1Q5TH74 334 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 SLC39A4Q6P5W5 647 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 POMGNT1Q8WZA1 660 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 UBXN4Q92575 508 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 USP13Q92995 863 aaPredicted RBP6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PPP1R13BQ96KQ4 1090 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PKMYT1Q99640 499 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 FUT8Q9BYC5 575 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 CUEDC2Q9H467 287 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 SLC24A3Q9HC58 644 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 HPS4Q9NQG7 708 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 CDH9Q9ULB4 789 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PCDHA7Q9UN72 937 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 TIMM13Q9Y5L4 95 aaPredicted RBP6.4□□□□□ -1.38
PTPRR-204ENST00000440835 EML5Q05BV3 1969 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 F5P12259 2224 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 ANAPC1Q9H1A4 1944 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 UBE4BO95155 1302 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 USP34Q70CQ2 3546 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PTPRDP23468 1912 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 A0A0A0MRY4 1105 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 GABRDO14764 452 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 EXTL3O43909 919 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PRAMEF12O95522 483 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 STAU1O95793 577 aaKnown RBP6.4□□□□□ -1.38
PTPRR-204ENST00000440835 OR4Q2P0C623 313 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 ZNF165P49910 485 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PSMD2Q13200 908 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 MTF1Q14872 753 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PLK5Q496M5 336 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 FAM171BQ6P995 826 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 TXNDC11Q6PKC3 985 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 NUDT18Q6ZVK8 323 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 TRMT11Q7Z4G4 463 aaKnown RBP6.4□□□□□ -1.38
PTPRR-204ENST00000440835 RASSF3Q86WH2 238 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 MNS1Q8NEH6 495 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 PDZD8Q8NEN9 1154 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 RASSF8Q8NHQ8 419 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 LRRC3BQ96PB8 259 aa6.4□□□□□ -1.38
PTPRR-204ENST00000440835 LPIN3Q9BQK8 851 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms