RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TRIM59Q8IWR1 403 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 CCDC105Q8IYK2 499 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 ARL14EPQ8N8R7 260 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-216ENST00000439475 EHBP1Q8NDI1 1231 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 WHAMMQ8TF30 809 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 USP13Q92995 863 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-216ENST00000439475 FAM81BQ96LP2 452 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 TWNKQ96RR1 684 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 SMG9Q9H0W8 520 aaKnown RBP11.08□□□□□ -0.64
MCF2L-216ENST00000439475 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 PNPLA8Q9NP80 782 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 TLR8Q9NR97 1041 aaKnown RBP11.08□□□□□ -0.64
MCF2L-216ENST00000439475 GCNT4Q9P109 453 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 CHORDC1Q9UHD1 332 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-216ENST00000439475 PIAS3Q9Y6X2 628 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 C5orf42Q9H799 3197 aa11.08□□□□□ -0.64
MCF2L-216ENST00000439475 TADA3O75528 432 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 PRAMEF12O95522 483 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 DCNP07585 359 aaKnown RBP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 MBL2P11226 248 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 VDRP11473 427 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 TCF3P15923 654 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 ERCC5P28715 1186 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 PLA2G5P39877 138 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 MTIF2P46199 727 aaKnown RBP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 SLC5A3P53794 718 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 CACNA2D1P54289 1103 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 RUNX3Q13761 415 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 MTF1Q14872 753 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 ITPRIPL2Q3MIP1 535 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 HECTD3Q5T447 861 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 PPP1R26Q5T8A7 1209 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 ARHGAP17Q68EM7 881 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 DDX42Q86XP3 938 aaKnown RBP eCLIP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 PPM1KQ8N3J5 372 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 KIAA1958Q8N8K9 716 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 TTC16Q8NEE8 873 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 PRSS33Q8NF86 280 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 ATOH1Q92858 354 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 RSPRY1Q96DX4 576 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 CYP2S1Q96SQ9 504 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 SMOQ99835 787 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 DUSP16Q9BY84 665 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 UBXN6Q9BZV1 441 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 FOXQ1Q9C009 403 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 NACA2Q9H009 215 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 IL37Q9NZH6 218 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 HESX1Q9UBX0 185 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 HMGXB4Q9UGU5 601 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 NDRG2Q9UN36 371 aaKnown RBP11.07□□□□□ -0.64
MCF2L-216ENST00000439475 ARHGAP26Q9UNA1 814 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 PCDHB4Q9Y5E5 795 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 NCANO14594 1321 aa11.07□□□□□ -0.64
MCF2L-216ENST00000439475 BDP1A6H8Y1 2624 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 OBSL1O75147 1896 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 ANAPC1Q9H1A4 1944 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 C2orf78A6NCI8 922 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 H0Y858 1186 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 SLC9A3R1O14745 358 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-216ENST00000439475 TNFRSF10BO14763 440 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 BEST1O76090 585 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 MBD3O95983 291 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 CD19P15391 556 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 ACO1P21399 889 aaKnown RBP11.06□□□□□ -0.64
MCF2L-216ENST00000439475 CD72P21854 359 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 PSEN1P49768 467 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 RAD23BP54727 409 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 SLC7A9P82251 487 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 LRRC32Q14392 662 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 STILQ15468 1287 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 SGO2Q562F6 1265 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 SNX30Q5VWJ9 437 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 SASS6Q6UVJ0 657 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 CLEC20AQ6ZU45 233 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 TADA2BQ86TJ2 420 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 CPA6Q8N4T0 437 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 SLC4A11Q8NBS3 891 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 ZMIZ2Q8NF64 920 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 SH3RF2Q8TEC5 729 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 OSCP1Q8WVF1 389 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 ZFYVE19Q96K21 471 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 CNOT6LQ96LI5 555 aaKnown RBP11.06□□□□□ -0.64
MCF2L-216ENST00000439475 LRRC3BQ96PB8 259 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 FAM83CQ9BQN1 747 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 IER2Q9BTL4 223 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 THAP9Q9H5L6 903 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 LMAN1LQ9HAT1 526 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 TMEM30AQ9NV96 361 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 DUS2Q9NX74 493 aaKnown RBP11.06□□□□□ -0.64
MCF2L-216ENST00000439475 GTSE1Q9NYZ3 720 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 CCL26Q9Y258 94 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 ZNF318Q5VUA4 2279 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
MCF2L-216ENST00000439475 MIA3Q5JRA6 1907 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 FAM92AA1XBS5 289 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 SPECC1L-ADORA2AF8WAN1 911 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 LEFTY2O00292 366 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 ARNTLO00327 626 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 LAMTOR5O43504 91 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms