RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 SMNDC1O75940 238 aaKnown RBP eCLIP16.06■□□□□ 0.16
APP-208ENST00000439274 HAUS5O94927 633 aa16.06■□□□□ 0.16
APP-208ENST00000439274 APOC2P02655 101 aa16.06■□□□□ 0.16
APP-208ENST00000439274 NEFHP12036 1026 aa16.06■□□□□ 0.16
APP-208ENST00000439274 KHDC1Q4VXA5 237 aaKnown RBP16.06■□□□□ 0.16
APP-208ENST00000439274 ZC3H12AQ5D1E8 599 aaKnown RBP16.06■□□□□ 0.16
APP-208ENST00000439274 WASHC2DQ5SRD0 308 aa16.06■□□□□ 0.16
APP-208ENST00000439274 DSTYKQ6XUX3 929 aa16.06■□□□□ 0.16
APP-208ENST00000439274 PRPF39Q86UA1 669 aaKnown RBP16.06■□□□□ 0.16
APP-208ENST00000439274 LRRN4Q8WUT4 740 aa16.06■□□□□ 0.16
APP-208ENST00000439274 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
APP-208ENST00000439274 TMEM120AQ9BXJ8 343 aa16.06■□□□□ 0.16
APP-208ENST00000439274 SMYD3Q9H7B4 428 aa16.06■□□□□ 0.16
APP-208ENST00000439274 TLE6Q9H808 572 aa16.06■□□□□ 0.16
APP-208ENST00000439274 SAR1AQ9NR31 198 aa16.06■□□□□ 0.16
APP-208ENST00000439274 USP18Q9UMW8 372 aa16.06■□□□□ 0.16
APP-208ENST00000439274 TRUB2O95900 331 aaKnown RBP16.06■□□□□ 0.16
APP-208ENST00000439274 ETV4P43268 484 aa16.06■□□□□ 0.16
APP-208ENST00000439274 PTDSS1P48651 473 aaKnown RBP16.06■□□□□ 0.16
APP-208ENST00000439274 ARFIP2P53365 341 aa16.06■□□□□ 0.16
APP-208ENST00000439274 SESN3P58005 492 aa16.06■□□□□ 0.16
APP-208ENST00000439274 EEF1DP3Q658K8 133 aa16.06■□□□□ 0.16
APP-208ENST00000439274 DARS2Q6PI48 645 aaKnown RBP16.06■□□□□ 0.16
APP-208ENST00000439274 TTC7BQ86TV6 843 aa16.06■□□□□ 0.16
APP-208ENST00000439274 ENDOVQ8N8Q3 282 aaKnown RBP16.06■□□□□ 0.16
APP-208ENST00000439274 ZNF398Q8TD17 642 aa16.06■□□□□ 0.16
APP-208ENST00000439274 CFAP36Q96G28 342 aa16.06■□□□□ 0.16
APP-208ENST00000439274 PHACTR1Q9C0D0 580 aa16.06■□□□□ 0.16
APP-208ENST00000439274 ASCC2Q9H1I8 757 aaPredicted RBP16.06■□□□□ 0.16
APP-208ENST00000439274 SLC24A3Q9HC58 644 aa16.06■□□□□ 0.16
APP-208ENST00000439274 MAP3K6O95382 1288 aa16.05■□□□□ 0.16
APP-208ENST00000439274 TNNC2P02585 160 aa16.05■□□□□ 0.16
APP-208ENST00000439274 CXCL8P10145 99 aa16.05■□□□□ 0.16
APP-208ENST00000439274 NEK3P51956 506 aa16.05■□□□□ 0.16
APP-208ENST00000439274 EFNA5P52803 228 aa16.05■□□□□ 0.16
APP-208ENST00000439274 BLMHQ13867 455 aa16.05■□□□□ 0.16
APP-208ENST00000439274 LY6KQ17RY6 165 aa16.05■□□□□ 0.16
APP-208ENST00000439274 C1orf228Q6PIY5 440 aa16.05■□□□□ 0.16
APP-208ENST00000439274 C4orf50Q6ZRC1 276 aa16.05■□□□□ 0.16
APP-208ENST00000439274 CMASQ8NFW8 434 aaPredicted RBP16.05■□□□□ 0.16
APP-208ENST00000439274 FNIP1Q8TF40 1166 aa16.05■□□□□ 0.16
APP-208ENST00000439274 ALKBH8Q96BT7 664 aaKnown RBP16.05■□□□□ 0.16
APP-208ENST00000439274 PTCD3Q96EY7 689 aaKnown RBP16.05■□□□□ 0.16
APP-208ENST00000439274 C12orf42Q96LP6 360 aa16.05■□□□□ 0.16
APP-208ENST00000439274 LHX5Q9H2C1 402 aa16.05■□□□□ 0.16
APP-208ENST00000439274 LRRC42Q9Y546 428 aa16.05■□□□□ 0.16
APP-208ENST00000439274 IKBKGQ9Y6K9 419 aa16.05■□□□□ 0.16
APP-208ENST00000439274 E5RJQ4 531 aa16.05■□□□□ 0.16
APP-208ENST00000439274 INHBAP08476 426 aa16.05■□□□□ 0.16
APP-208ENST00000439274 DHRS4L1P0CG22 281 aa16.05■□□□□ 0.16
APP-208ENST00000439274 GMPSP49915 693 aaPredicted RBP16.05■□□□□ 0.16
APP-208ENST00000439274 ZNF200P98182 395 aaPredicted RBP16.05■□□□□ 0.16
APP-208ENST00000439274 ROR1Q01973 937 aa16.05■□□□□ 0.16
APP-208ENST00000439274 ZBTB16Q05516 673 aa16.05■□□□□ 0.16
APP-208ENST00000439274 TMEM132AQ24JP5 1023 aa16.05■□□□□ 0.16
APP-208ENST00000439274 SPDYAQ5MJ70 313 aa16.05■□□□□ 0.16
APP-208ENST00000439274 FAXCQ5TGI0 409 aa16.05■□□□□ 0.16
APP-208ENST00000439274 DCAF15Q66K64 600 aa16.05■□□□□ 0.16
APP-208ENST00000439274 CDHR3Q6ZTQ4 885 aa16.05■□□□□ 0.16
APP-208ENST00000439274 TRAPPC12Q8WVT3 735 aa16.05■□□□□ 0.16
APP-208ENST00000439274 SLC44A1Q8WWI5 657 aa16.05■□□□□ 0.16
APP-208ENST00000439274 APOPT1Q96IL0 206 aa16.05■□□□□ 0.16
APP-208ENST00000439274 FRMD8P1Q9BZ68 369 aaPredicted RBP16.05■□□□□ 0.16
APP-208ENST00000439274 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.05■□□□□ 0.16
APP-208ENST00000439274 SIX4Q9UIU6 781 aa16.05■□□□□ 0.16
APP-208ENST00000439274 TEX264Q9Y6I9 313 aa16.05■□□□□ 0.16
APP-208ENST00000439274 KAT6AQ92794 2004 aa16.04■□□□□ 0.16
APP-208ENST00000439274 IQANK1A0A1B0GTG1 560 aa16.04■□□□□ 0.16
APP-208ENST00000439274 MICAL2O94851 1124 aa16.04■□□□□ 0.16
APP-208ENST00000439274 CDH6P55285 790 aa16.04■□□□□ 0.16
APP-208ENST00000439274 PRKG1Q13976 671 aa16.04■□□□□ 0.16
APP-208ENST00000439274 PRKD1Q15139 912 aaPredicted RBP16.04■□□□□ 0.16
APP-208ENST00000439274 FAM102AQ5T9C2 384 aaPredicted RBP16.04■□□□□ 0.16
APP-208ENST00000439274 CDCA2Q69YH5 1023 aaPredicted RBP16.04■□□□□ 0.16
APP-208ENST00000439274 RINLQ6ZS11 566 aa16.04■□□□□ 0.16
APP-208ENST00000439274 SH2D5Q6ZV89 423 aa16.04■□□□□ 0.16
APP-208ENST00000439274 APBB1IPQ7Z5R6 666 aaPredicted RBP16.04■□□□□ 0.16
APP-208ENST00000439274 SLC4A11Q8NBS3 891 aa16.04■□□□□ 0.16
APP-208ENST00000439274 UBA3Q8TBC4 463 aa16.04■□□□□ 0.16
APP-208ENST00000439274 SKA1Q96BD8 255 aa16.04■□□□□ 0.16
APP-208ENST00000439274 ANKRD36BP1Q96IX9 119 aa16.04■□□□□ 0.16
APP-208ENST00000439274 NLRP4Q96MN2 994 aa16.04■□□□□ 0.16
APP-208ENST00000439274 ELOVL4Q9GZR5 314 aa16.04■□□□□ 0.16
APP-208ENST00000439274 GJA3Q9Y6H8 435 aa16.04■□□□□ 0.16
APP-208ENST00000439274 MGAMO43451 1857 aa16.04■□□□□ 0.16
APP-208ENST00000439274 MED7O43513 233 aa16.04■□□□□ 0.16
APP-208ENST00000439274 GRAP2O75791 330 aa16.04■□□□□ 0.16
APP-208ENST00000439274 RNF8O76064 485 aa16.04■□□□□ 0.16
APP-208ENST00000439274 NFICP08651 508 aa16.04■□□□□ 0.16
APP-208ENST00000439274 DLDP09622 509 aaKnown RBP16.04■□□□□ 0.16
APP-208ENST00000439274 KCNJ11Q14654 390 aa16.04■□□□□ 0.16
APP-208ENST00000439274 CDO1Q16878 200 aa16.04■□□□□ 0.16
APP-208ENST00000439274 C15orf59Q2T9L4 293 aaPredicted RBP16.04■□□□□ 0.16
APP-208ENST00000439274 TRNP1Q6NT89 227 aa16.04■□□□□ 0.16
APP-208ENST00000439274 ZBTB8OSQ8IWT0 167 aa16.04■□□□□ 0.16
APP-208ENST00000439274 FAF2Q96CS3 445 aa16.04■□□□□ 0.16
APP-208ENST00000439274 PIWIL1Q96J94 861 aaKnown RBP16.04■□□□□ 0.16
APP-208ENST00000439274 BTBD10Q9BSF8 475 aa16.04■□□□□ 0.16
APP-208ENST00000439274 MECRQ9BV79 373 aa16.04■□□□□ 0.16
APP-208ENST00000439274 OSBPL1AQ9BXW6 950 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms