RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 CUL2Q13617 745 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 CC2D1AQ6P1N0 951 aaPredicted RBP26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 TRIM59Q8IWR1 403 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 ARL14EPQ8N8R7 260 aaPredicted RBP26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 FBXO32Q969P5 355 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 SMOQ99835 787 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 GCNT4Q9P109 453 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 C2orf78A6NCI8 922 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 TNFRSF10BO14763 440 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 CD72P21854 359 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 KPNA1P52294 538 aaPredicted RBP26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 MAP3K7CLP57077 242 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 ZNF394Q53GI3 561 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 TMEM176AQ96HP8 235 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 ZFYVE19Q96K21 471 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 HEXIM2Q96MH2 286 aaKnown RBP26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 CYP2S1Q96SQ9 504 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 ARID3AQ99856 593 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 FBXO44Q9H4M3 255 aa26.19■■□□□ 1.78
RAPGEF1-206ENST00000438647 ZNF638Q14966 1978 aaKnown RBP26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 ABL1P00519 1130 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 NHLH1Q02575 133 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 ZMIZ2Q8NF64 920 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 NT5C1BQ96P26 610 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 SLC22A12Q96S37 553 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 PNPLA8Q9NP80 782 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 IL37Q9NZH6 218 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 DLGAP2Q9P1A6 1054 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 DACH1Q9UI36 760 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 ARHGAP26Q9UNA1 814 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 F5P12259 2224 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 TICRRQ7Z2Z1 1910 aa26.18■■□□□ 1.78
RAPGEF1-206ENST00000438647 AFPP02771 609 aaKnown RBP26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 TARSP26639 723 aaKnown RBP26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 KCNH2Q12809 1159 aa26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 CLEC20AQ6ZU45 233 aa26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 SCAMP5Q8TAC9 235 aa26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 FAM3CQ92520 227 aa26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 GKN1Q9NS71 199 aa26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 ANAPC1Q9H1A4 1944 aa26.17■■□□□ 1.78
RAPGEF1-206ENST00000438647 CACNA1HO95180 2353 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 FAM92AA1XBS5 289 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 BEST1O76090 585 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 TCF3P15923 654 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 RAD23BP54727 409 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 LRMPQ12912 555 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 USP4Q13107 963 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 MTF1Q14872 753 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 PDGFRLQ15198 375 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 ZNF77Q15935 545 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 TPD52L1Q16890 204 aaPredicted RBP26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 ITPRIPL2Q3MIP1 535 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 RALGPS2Q86X27 583 aaPredicted RBP26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 SLC4A11Q8NBS3 891 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 FAM83CQ9BQN1 747 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 GTSE1Q9NYZ3 720 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 MTF2Q9Y483 593 aaPredicted RBP26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 COL4A2P08572 1712 aa26.16■■□□□ 1.78
RAPGEF1-206ENST00000438647 H0Y858 1186 aa26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 OAS1P00973 400 aaKnown RBP26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 SLC7A9P82251 487 aa26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 PPP1R26Q5T8A7 1209 aaPredicted RBP26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 SNX30Q5VWJ9 437 aa26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 SH3RF2Q8TEC5 729 aa26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 DUSP16Q9BY84 665 aa26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 NDRG2Q9UN36 371 aaKnown RBP26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 MIA3Q5JRA6 1907 aa26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 MYH10P35580 1976 aa26.15■■□□□ 1.78
RAPGEF1-206ENST00000438647 SHISA7A6NL88 538 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 SPECC1L-ADORA2AF8WAN1 911 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 OLFM2O95897 454 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 RPS9P46781 194 aaKnown RBP26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 TUBP50607 506 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 SLC8A3P57103 927 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 ANGPT1Q15389 498 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 ARHGAP17Q68EM7 881 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 PPM1KQ8N3J5 372 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 TTC16Q8NEE8 873 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 ATOH1Q92858 354 aaPredicted RBP26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 CLDN23Q96B33 292 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 CNOT6LQ96LI5 555 aaKnown RBP26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 CHORDC1Q9UHD1 332 aaPredicted RBP26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 COL4A3Q01955 1670 aa26.14■■□□□ 1.78
RAPGEF1-206ENST00000438647 CTHP32929 405 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 AMPD2Q01433 879 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 TNK2Q07912 1038 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 RUNX3Q13761 415 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 HECTD3Q5T447 861 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 CREBRFQ8IUR6 639 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 KIAA1958Q8N8K9 716 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 RIN3Q8TB24 985 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 OSCP1Q8WVF1 389 aa26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 TLR8Q9NR97 1041 aaKnown RBP26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 KIF26AQ9ULI4 1882 aaPredicted RBP26.13■■□□□ 1.77
RAPGEF1-206ENST00000438647 ZDHHC11BP0C7U3 371 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 ERCC5P28715 1186 aaPredicted RBP26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 IFNAR2P48551 515 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 DPCR1Q3MIW9 517 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 DDX42Q86XP3 938 aaKnown RBP eCLIP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms