RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF268Q14587 947 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PDK1Q15118 436 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 Q3C1V9 767 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FASTKD1Q53R41 847 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ZPBP2Q6X784 338 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RYBPQ8N488 228 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 HELQQ8TDG4 1101 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 APBB2Q92870 758 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ABTB1Q969K4 478 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 LENG9Q96B70 501 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF669Q96BR6 464 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 OXNAD1Q96HP4 312 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PPP1R36Q96LQ0 422 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FSD1LQ9BXM9 530 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ANLNQ9NQW6 1124 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 SAE1Q9UBE0 346 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 KIAA1257Q9ULG3 409 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ADGRA3Q8IWK6 1321 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RGPD5Q99666 1765 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 E2F8A0AVK6 867 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 H0YGN5 161 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ALOX15BO15296 676 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ATP9AO75110 1047 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PDGFRBP09619 1106 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RAP1GAPP47736 663 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 GCLCP48506 637 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 SULT1E1P49888 294 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PEX5P50542 639 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 EFTUD2Q15029 972 aaKnown RBP eCLIP6.94□□□□□ -1.31e-9■□□□□ 8.8
CSDE1-205ENST00000438362 KIF19Q2TAC6 998 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TEDDM1Q5T9Z0 273 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 DCAF12L1Q5VU92 463 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PRAMEF18Q5VWM3 479 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TDRD10Q5VZ19 366 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 LLGL2Q6P1M3 1020 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RSPH3Q86UC2 560 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 VSIG10LQ86VR7 867 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FITM2Q8N6M3 262 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ZBTB10Q96DT7 871 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 MMP19Q99542 508 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 NAT9Q9BTE0 207 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 C10orf88Q9H8K7 445 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ARMCX1Q9P291 453 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 NOCTQ9UK39 431 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 DNAJC16Q9Y2G8 782 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 NFS1Q9Y697 457 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 VWA5AO00534 786 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FKBP6O75344 327 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ITGAVP06756 1048 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 KDELR1P24390 212 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RXRBP28702 533 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 MIPP30301 263 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FDFT1P37268 417 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PAPOLAP51003 745 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TPI1P60174 286 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PDE1CQ14123 709 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 CYP1B1Q16678 543 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PARP6Q2NL67 630 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 KBTBD12Q3ZCT8 623 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ACCSLQ4AC99 568 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 CCNJLQ8IV13 435 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 CCDC60Q8IWA6 550 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TTC8Q8TAM2 541 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FAM172AQ8WUF8 416 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TMEM176AQ96HP8 235 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FAM84AQ96KN4 292 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 HAUS8Q9BT25 410 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ARHGAP26Q9UNA1 814 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 SDR42E2A6NKP2 422 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ENTPD5O75356 428 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 GNAT1P11488 350 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 CREB1P16220 341 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 CNTFP26441 200 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RPL22P35268 128 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TMED1Q13445 227 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 DPYSL3Q14195 570 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 MAPRE2Q15555 327 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 UGCGQ16739 394 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 UGP2Q16851 508 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 FKBP1CQ5VVH2 108 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 IRGCQ6NXR0 463 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 C6orf89Q6UWU4 347 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 C16orf89Q6UX73 402 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 IZUMO2Q6UXV1 221 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 LRRC74BQ6ZQY2 392 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ECHDC2Q86YB7 292 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ZC3H3Q8IXZ2 948 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RNF168Q8IYW5 571 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 BBS5Q8N3I7 341 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RNF139Q8WU17 664 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TFB1MQ8WVM0 346 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 EXT2Q93063 718 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ST6GALNAC4Q9H4F1 302 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 TASP1Q9H6P5 420 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ACSS3Q9H6R3 686 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 CYP3A43Q9HB55 503 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PAPOLBQ9NRJ5 636 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 DCDC2Q9UHG0 476 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms