RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 RAB6CQ53S08 254 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 WLSQ5T9L3 541 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 ARFGAP1Q8N6T3 406 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 C12orf29Q8N999 325 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 MICAL1Q8TDZ2 1067 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 RAB6CQ9H0N0 254 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 ARHGEF3Q9NR81 526 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 SNCAIPQ9Y6H5 919 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 E5RJQ4 531 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 GPR25O00155 361 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 COPEO14579 308 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 PYGBP11216 843 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 GPD1P21695 349 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 PHKA2P46019 1235 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 ARFIP2P53365 341 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 EFHC2Q5JST6 749 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 NUDCD1Q96RS6 583 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 ACSS3Q9H6R3 686 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 C15orf41Q9Y2V0 281 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 ATP5HO75947 161 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 TGFB3P10600 412 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 RIPK1Q13546 671 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 TAF11Q15544 211 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 TDRPQ86YL5 185 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 SULF1Q8IWU6 871 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 GPR20Q99678 358 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 APOL6Q9BWW8 343 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 SDCBP2Q9H190 292 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.47■□□□□ 0.39
TTC3-209ENST00000438055 HEY2Q9UBP5 337 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 SYNJ2BP-COX16A0A087WUM0 186 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 IRF6O14896 467 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 KITP10721 976 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 NDST1P52848 882 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 RIOX2Q8IUF8 465 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 SLC4A11Q8NBS3 891 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 COX16Q9P0S2 106 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 TRIM49D1C9J1S8 452 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 HAUS5O94927 633 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 BGNP21810 368 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 PCK1P35558 622 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 MCCD1P59942 119 aaPredicted RBP17.47■□□□□ 0.39
TTC3-209ENST00000438055 TMEM132DQ14C87 1099 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 MAGEC3Q8TD91 643 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 DENND1AQ8TEH3 1009 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 SMARCAD1Q9H4L7 1026 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
TTC3-209ENST00000438055 MARCOQ9UEW3 520 aaPredicted RBP17.47■□□□□ 0.39
TTC3-209ENST00000438055 ZC3H7BQ9UGR2 993 aaKnown RBP17.47■□□□□ 0.39
TTC3-209ENST00000438055 FAM155BO75949 473 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 TRUB2O95900 331 aaKnown RBP17.46■□□□□ 0.39
TTC3-209ENST00000438055 PPP1R15BQ5SWA1 713 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 CCDC62Q6P9F0 684 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 KIF12Q96FN5 646 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 HESX1Q9UBX0 185 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 TSPAN16Q9UKR8 245 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 SNX9Q9Y5X1 595 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 KIAA1217Q5T5P2 1943 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 I3L4J1 428 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 SDC4P31431 198 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 GSCP56915 257 aaPredicted RBP17.46■□□□□ 0.39
TTC3-209ENST00000438055 BMPR2Q13873 1038 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 RFX8Q6ZV50 586 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 EXOC8Q8IYI6 725 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 AGGF1Q8N302 714 aaeCLIP17.46■□□□□ 0.392e-7■■□□□ 11.9
TTC3-209ENST00000438055 NAT8LQ8N9F0 302 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 RFWD2Q8NHY2 731 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 MMP19Q99542 508 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 TBC1D10AQ9BXI6 508 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 EURLQ9NYK6 297 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 SIX4Q9UIU6 781 aa17.46■□□□□ 0.39
TTC3-209ENST00000438055 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 TCRBV9S1A1TA0A576 114 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 C2orf71A6NGG8 1288 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 B4GALT4O60513 344 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 IL18RAPO95256 599 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 RCN2Q14257 317 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 AMHR2Q16671 573 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 ZC3H12AQ5D1E8 599 aaKnown RBP17.46■□□□□ 0.38
TTC3-209ENST00000438055 IGDCC3Q8IVU1 814 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 UBR7Q8N806 425 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 CCDC110Q8TBZ0 833 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 PPCSQ9HAB8 311 aa17.46■□□□□ 0.38
TTC3-209ENST00000438055 GEMIN8Q9NWZ8 242 aaKnown RBP17.46■□□□□ 0.38
TTC3-209ENST00000438055 TCRBV5S1A1TA0A578 114 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 INSRRP14616 1297 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 TMPRSS15P98073 1019 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 TMEM62Q0P6H9 643 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 CELF3Q5SZQ8 465 aaKnown RBP17.45■□□□□ 0.38
TTC3-209ENST00000438055 TSHZ1Q6ZSZ6 1077 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 MOB2Q70IA6 237 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 ACOT1Q86TX2 421 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 SESTD1Q86VW0 696 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 NIPA2Q8N8Q9 360 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 PIWIL1Q96J94 861 aaKnown RBP17.45■□□□□ 0.38
TTC3-209ENST00000438055 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 HBP1O60381 514 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 ACVR2BQ13705 512 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 GOLGA7BQ2TAP0 167 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms