RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 KCTD6Q8NC69 237 aa16.11■□□□□ 0.17
SGCE-205ENST00000437425 MYCBPAPQ8TBZ2 947 aa16.11■□□□□ 0.17
SGCE-205ENST00000437425 FAM71BQ8TC56 605 aa16.11■□□□□ 0.17
SGCE-205ENST00000437425 SUSD3Q96L08 255 aa16.11■□□□□ 0.17
SGCE-205ENST00000437425 MED10Q9BTT4 135 aa16.11■□□□□ 0.17
SGCE-205ENST00000437425 TMEM161AQ9NX61 479 aa16.11■□□□□ 0.17
SGCE-205ENST00000437425 WHRNQ9P202 907 aa16.11■□□□□ 0.17
SGCE-205ENST00000437425 DRG1Q9Y295 367 aaKnown RBP16.11■□□□□ 0.17
SGCE-205ENST00000437425 HOXA2O43364 376 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 TRAPPC3O43617 180 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 ITIH2P19823 946 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 KDELR1P24390 212 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 ECHS1P30084 290 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 PTK6Q13882 451 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 TIGD5Q53EQ6 642 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 NOMO2Q5JPE7 1267 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 CFAP58Q5T655 872 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 DAB2IPQ5VWQ8 1189 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 SCUBE3Q8IX30 993 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 ARFGAP1Q8N6T3 406 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 C1orf54Q8WWF1 131 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 SEPT8Q92599 483 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 SMARCD1Q96GM5 515 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 HINFPQ9BQA5 517 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 TRIM51Q9BSJ1 452 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 HEMGNQ9BXL5 484 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 PRDM16Q9HAZ2 1276 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 LRRC4Q9HBW1 653 aa16.1■□□□□ 0.17
SGCE-205ENST00000437425 MDM4O15151 490 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 AFF1P51825 1210 aaKnown RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 TFDP2Q14188 446 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 MBTPS1Q14703 1052 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 CCDC14Q49A88 953 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 MDH1BQ5I0G3 518 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 BBS12Q6ZW61 710 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 ZNF365Q70YC5 407 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 STRADAQ7RTN6 431 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 PIGZQ86VD9 579 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 PSTKQ8IV42 348 aaKnown RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 SIX6OS1Q8N1H7 587 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 RAPGEF5Q92565 580 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 CENPIQ92674 756 aaPredicted RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 NKD2Q969F2 451 aaPredicted RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 TRIM62Q9BVG3 475 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 UNC93B1Q9H1C4 597 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 DPH5Q9H2P9 285 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 ZWILCHQ9H900 591 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 PNPLA8Q9NP80 782 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.09■□□□□ 0.17
SGCE-205ENST00000437425 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 INPP5FQ9Y2H2 1132 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 C3orf70A6NLC5 250 aaPredicted RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 TULP2O00295 520 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 LIASO43766 372 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 ENDOD1O94919 500 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 TCF4P15884 667 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 RDXP35241 583 aaKnown RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 FLT3P36888 993 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 TSPY1Q01534 308 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 KRT17Q04695 432 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 DSC1Q08554 894 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 BYSLQ13895 437 aaKnown RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 SLMAPQ14BN4 828 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 ATP13A4Q4VNC1 1196 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 PLEKHG4Q58EX7 1191 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 LRIG3Q6UXM1 1119 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 RTN4RL1Q86UN2 441 aaPredicted RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 KHSRPQ92945 711 aaKnown RBP eCLIP16.09■□□□□ 0.173e-6■■■■□ 25.3
SGCE-205ENST00000437425 CCDC114Q96M63 670 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 FAM193BQ96PV7 902 aaPredicted RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 DDX23Q9BUQ8 820 aaKnown RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 MAK16Q9BXY0 300 aaKnown RBP16.09■□□□□ 0.17
SGCE-205ENST00000437425 CNGB3Q9NQW8 809 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 CHST7Q9NS84 486 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 ZDHHC18Q9NUE0 388 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 TMEM51Q9NW97 253 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 RRN3Q9NYV6 651 aa16.09■□□□□ 0.17
SGCE-205ENST00000437425 TDRD15B5MCY1 1934 aaKnown RBP16.08■□□□□ 0.16
SGCE-205ENST00000437425 PI4K2BG5E9Z4 385 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 DAB1O75553 588 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 ITGAVP06756 1048 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 LCP1P13796 627 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 IL1R2P27930 398 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 TKTP29401 623 aaKnown RBP16.08■□□□□ 0.16
SGCE-205ENST00000437425 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
SGCE-205ENST00000437425 MATKP42679 507 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 MRPS5P82675 430 aaKnown RBP16.08■□□□□ 0.16
SGCE-205ENST00000437425 CBX1P83916 185 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 INTS6LQ5JSJ4 861 aaKnown RBP16.08■□□□□ 0.16
SGCE-205ENST00000437425 KAZNQ674X7 775 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 FAM35AQ86V20 835 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 ABI1Q8IZP0 508 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 SCML4Q8N228 414 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.16
SGCE-205ENST00000437425 SNF8Q96H20 258 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms