RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SLC39A11Q8N1S5 342 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 WDTC1Q8N5D0 677 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 C12orf29Q8N999 325 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 SPATA18Q8TC71 538 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CYFIP2Q96F07 1278 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 IGSF21Q96ID5 467 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 B3GALT6Q96L58 329 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF558Q96NG5 402 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 SLC9A7Q96T83 725 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 INSM2Q96T92 566 aaPredicted RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 YME1L1Q96TA2 773 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 RAD9AQ99638 391 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 VN1R3Q9BXE9 311 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CCSER2Q9H7U1 834 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 POLMQ9NP87 494 aaPredicted RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CRTAC1Q9NQ79 661 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 TRMT1Q9NXH9 659 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 DDX43Q9NXZ2 648 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 PUF60Q9UHX1 559 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 DSEQ9UL01 958 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 INSL6Q9Y581 213 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 NR2E3Q9Y5X4 410 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 MYBPHLA2RUH7 354 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 LCHNA4D1U4 455 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 TMCO5BA8MYB1 307 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 SYN3O14994 580 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 MED7O43513 233 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 TNFRSF21O75509 655 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 FTLP02792 175 aaPredicted RBP7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 CCDC175P0C221 793 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 GZMAP12544 262 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 LAG3P18627 525 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 CDH5P33151 784 aaPredicted RBP7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 MAGEA1P43355 309 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PSMC1P62191 440 aaKnown RBP7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PRR20EP86478 221 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PRR20CP86479 221 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PRR20DP86480 221 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PRR20BP86481 221 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PRR20AP86496 221 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 YWHAHQ04917 246 aaPredicted RBP7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 SGO2Q562F6 1265 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 RTP2Q5QGT7 225 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 FAM171A1Q5VUB5 890 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 ARHGAP17Q68EM7 881 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 FAM109BQ6ICB4 259 aaPredicted RBP7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 OVOS1Q6IE37 1185 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 ACAD10Q6JQN1 1059 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 FUT10Q6P4F1 479 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 LCLAT1Q6UWP7 414 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 TRIM72Q6ZMU5 477 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PAQR9Q6ZVX9 377 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 LRRTM3Q86VH5 581 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 VPS36Q86VN1 386 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PASD1Q8IV76 773 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 COLGALT1Q8NBJ5 622 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 B3GALNT2Q8NCR0 500 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 OR10T2Q8NGX3 314 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 CPA5Q8WXQ8 436 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 TNIP3Q96KP6 325 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 TMEM209Q96SK2 561 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PKMYT1Q99640 499 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 ACBD6Q9BR61 282 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 PACSIN1Q9BY11 444 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 LACRTQ9GZZ8 138 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 ISCUQ9H1K1 167 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 LHX5Q9H2C1 402 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 NEUROD4Q9HD90 331 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 FAM49BQ9NUQ9 324 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 SEPT11Q9NVA2 429 aaKnown RBP7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 TRIM10Q9UDY6 481 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 CYTH4Q9UIA0 394 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 CDH9Q9ULB4 789 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 SCN5AQ14524 2016 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 SF3B1O75533 1304 aaKnown RBP eCLIP7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 ANK1P16157 1881 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 RALGAPA2Q2PPJ7 1873 aa7.45□□□□□ -1.22
LSM3P3-201ENST00000436601 ARHGEF37A1IGU5 675 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 A6NHS1 94 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 GRXCR1A8MXD5 290 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 H0YGN5 161 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 CLDN5O00501 218 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 ZSCAN12O43309 604 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 TBC1D4O60343 1298 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 RTN2O75298 545 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 ARHGEF15O94989 841 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 LSM8O95777 96 aaKnown RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 H2AFZP0C0S5 128 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 OR4Q2P0C623 313 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 CCDC130P13994 396 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 EPB42P16452 691 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 PCSK1P29120 753 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 GPD2P43304 727 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 CDR1P51861 262 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 VAV2P52735 878 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 RABGGTBP53611 331 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 GALCP54803 685 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 NOMO3P69849 1222 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 ELAVL2Q12926 359 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms