RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 MAGEF1Q9HAY2 307 aa16.73■□□□□ 0.27
CALD1-208ENST00000435928 SMPD4Q9NXE4 827 aa16.73■□□□□ 0.27
CALD1-208ENST00000435928 CPQQ9Y646 472 aa16.73■□□□□ 0.27
CALD1-208ENST00000435928 ABCA7Q8IZY2 2146 aa16.73■□□□□ 0.27
CALD1-208ENST00000435928 USP24Q9UPU5 2620 aa16.73■□□□□ 0.27
CALD1-208ENST00000435928 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
CALD1-208ENST00000435928 K7EQS6 105 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 SLC9A3R1O14745 358 aaPredicted RBP16.72■□□□□ 0.27
CALD1-208ENST00000435928 TM4SF5O14894 197 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 CUTAO60888 179 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 CLSTN1O94985 981 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 YEATS4O95619 227 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 OLFM2O95897 454 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 OAS1P00973 400 aaKnown RBP16.72■□□□□ 0.27
CALD1-208ENST00000435928 PTPN1P18031 435 aaKnown RBP16.72■□□□□ 0.27
CALD1-208ENST00000435928 CACNA2D1P54289 1103 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 SNRPFP62306 86 aaKnown RBP16.72■□□□□ 0.27
CALD1-208ENST00000435928 TAF10Q12962 218 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 ST3GAL2Q16842 350 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 USP39Q53GS9 565 aaKnown RBP16.72■□□□□ 0.27
CALD1-208ENST00000435928 ANO7Q6IWH7 933 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 UNC13DQ70J99 1090 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 C11orf74Q86VG3 221 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 DDX42Q86XP3 938 aaKnown RBP eCLIP16.72■□□□□ 0.27
CALD1-208ENST00000435928 B3GALNT2Q8NCR0 500 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 CHAMP1Q96JM3 812 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 EDEM2Q9BV94 578 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 ZNF518BQ9C0D4 1074 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 RNF38Q9H0F5 515 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 TFIP11Q9UBB9 837 aaKnown RBP16.72■□□□□ 0.27
CALD1-208ENST00000435928 ANGPTL2Q9UKU9 493 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 MMP17Q9ULZ9 603 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 NME7Q9Y5B8 376 aa16.72■□□□□ 0.27
CALD1-208ENST00000435928 PLXND1Q9Y4D7 1925 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 BCLAF3A2AJT9 711 aaKnown RBP16.71■□□□□ 0.27
CALD1-208ENST00000435928 A8MXQ7 604 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 SCAMP3O14828 347 aaKnown RBP16.71■□□□□ 0.27
CALD1-208ENST00000435928 STAU1O95793 577 aaKnown RBP16.71■□□□□ 0.27
CALD1-208ENST00000435928 CAVIN2O95810 425 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 FAM163BP0C2L3 166 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 MBL2P11226 248 aaPredicted RBP16.71■□□□□ 0.27
CALD1-208ENST00000435928 DHCR24Q15392 516 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 GAB4Q2WGN9 574 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 SHC4Q6S5L8 630 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 PDZD8Q8NEN9 1154 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.27
CALD1-208ENST00000435928 CNOT6LQ96LI5 555 aaKnown RBP16.71■□□□□ 0.27
CALD1-208ENST00000435928 TMEM30AQ9NV96 361 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 CFAP97Q9P2B7 532 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 NXF1Q9UBU9 619 aaKnown RBP16.71■□□□□ 0.27
CALD1-208ENST00000435928 INVSQ9Y283 1065 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 FRYQ5TBA9 3013 aa16.71■□□□□ 0.27
CALD1-208ENST00000435928 ATP8B3O60423 1300 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 CLDN5O00501 218 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 PHACTR2O75167 634 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 RTN3O95197 1032 aaPredicted RBP16.7■□□□□ 0.26
CALD1-208ENST00000435928 ADH1CP00326 375 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 ATICP31939 592 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 MYL6P60660 151 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 EHHADHQ08426 723 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 N4BP2L1Q5TBK1 243 aaPredicted RBP16.7■□□□□ 0.26
CALD1-208ENST00000435928 PMS2CLQ68D20 193 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 TTC30AQ86WT1 665 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 ADGRG2Q8IZP9 1017 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 CCDC33Q8N5R6 958 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 MDGA1Q8NFP4 955 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 FBXO32Q969P5 355 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 PNKPQ96T60 521 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
CALD1-208ENST00000435928 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 XYLT2Q9H1B5 865 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
CALD1-208ENST00000435928 CEP295Q9C0D2 2601 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 TNRC6BQ9UPQ9 1833 aaKnown RBP16.7■□□□□ 0.26
CALD1-208ENST00000435928 CFAP47Q6ZTR5 3102 aa16.7■□□□□ 0.26
CALD1-208ENST00000435928 POLR2DO15514 142 aaKnown RBP16.69■□□□□ 0.26
CALD1-208ENST00000435928 EXOC3O60645 756 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 ALDH1A2O94788 518 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 APODP05090 189 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 ADH5P11766 374 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 YWHAQP27348 245 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 CASP1P29466 404 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 PMLP29590 882 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 EIF2DP41214 584 aaKnown RBP16.69■□□□□ 0.26
CALD1-208ENST00000435928 MRPS21P82921 87 aaKnown RBP16.69■□□□□ 0.26
CALD1-208ENST00000435928 BIRC3Q13489 604 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 CRY1Q16526 586 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 BMT2Q1RMZ1 405 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 ZNF699Q32M78 642 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 CYP2U1Q7Z449 544 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 C12orf56Q8IXR9 622 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 ALLCQ8N6M5 410 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 OVCA2Q8WZ82 227 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 ZNF516Q92618 1163 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 GZF1Q9H116 711 aaPredicted RBP16.69■□□□□ 0.26
CALD1-208ENST00000435928 BLZF1Q9H2G9 400 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms