RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SPATA31C2B4DYI2 1134 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 PMPCBO75439 489 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 USP2O75604 605 aaPredicted RBP16.21■□□□□ 0.19
NEDD4-202ENST00000435532 SLC8A1P32418 973 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 CASP4P49662 377 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 NDUFV1P49821 464 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
NEDD4-202ENST00000435532 ZBTB41Q5SVQ8 909 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 COPS5Q92905 334 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 GAD1Q99259 594 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 IL25Q9H293 177 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 DDHD2O94830 711 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 CYP2A6P11509 494 aaPredicted RBP16.21■□□□□ 0.19
NEDD4-202ENST00000435532 EIF4BP23588 611 aaKnown RBP16.21■□□□□ 0.19
NEDD4-202ENST00000435532 TATDN1Q6P1N9 297 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 BTNL9Q6UXG8 535 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 CCNJLQ8IV13 435 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 UPF1Q92900 1129 aaKnown RBP eCLIP16.21■□□□□ 0.19
NEDD4-202ENST00000435532 GIT1Q9Y2X7 761 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 ALG6Q9Y672 507 aa16.21■□□□□ 0.19
NEDD4-202ENST00000435532 FRMD3A2A2Y4 597 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 GTPBP10A4D1E9 387 aaKnown RBP16.21■□□□□ 0.18
NEDD4-202ENST00000435532 DYRK3O43781 588 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 MAFO75444 373 aaPredicted RBP16.21■□□□□ 0.18
NEDD4-202ENST00000435532 LAG3P18627 525 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 NTRK3Q16288 839 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 RMDN2Q96LZ7 410 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 APOL5Q9BWW9 433 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 SLC28A3Q9HAS3 691 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 TBC1D13Q9NVG8 400 aa16.21■□□□□ 0.18
NEDD4-202ENST00000435532 POLR2EP19388 210 aaKnown RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 IFT88Q13099 833 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 TNFSF13BQ9Y275 285 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 DRG1Q9Y295 367 aaKnown RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 SOAT2O75908 522 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 KITP10721 976 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 GZMAP12544 262 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 GRIN1Q05586 938 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 PDCLQ13371 301 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 ITGA7Q13683 1181 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 MAP4K3Q8IVH8 894 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 TAS1R2Q8TE23 839 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 OSCP1Q8WVF1 389 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 PGLYRP2Q96PD5 576 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 GBP5Q96PP8 586 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 RBM15Q96T37 977 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 NEUROG2Q9H2A3 272 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 FOXN3O00409 490 aaPredicted RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 IGSF6O95976 241 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 FGBP02675 491 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 MZF1P28698 734 aaPredicted RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 SCNN1GP51170 649 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 MRPS25P82663 173 aaKnown RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 KLHL29Q96CT2 875 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 PPP1R16AQ96I34 528 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 MRGBPQ9NV56 204 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 TARSL2A2RTX5 802 aaKnown RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 FARP2O94887 1054 aaPredicted RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 APOA4P06727 396 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 SELPP16109 830 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 MLH1P40692 756 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 ILF2Q12905 390 aaKnown RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 DUSP28Q4G0W2 176 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 CYP2W1Q8TAV3 490 aa16.2■□□□□ 0.18
NEDD4-202ENST00000435532 POP1Q99575 1024 aaKnown RBP16.2■□□□□ 0.18
NEDD4-202ENST00000435532 LRRIQ3A6PVS8 624 aaPredicted RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 ZNF135P52742 658 aaPredicted RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 KRT72Q14CN4 511 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 NBPF20Q3BBV1 942 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 E4F1Q66K89 784 aaPredicted RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 RASGRP2Q7LDG7 609 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 FBXO22Q8NEZ5 403 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 SENP8Q96LD8 212 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 TACO1Q9BSH4 297 aaKnown RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 TASP1Q9H6P5 420 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 LNPEPQ9UIQ6 1025 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 MRFAP1Q9Y605 127 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 NDUFS2O75306 463 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 ATP5HO75947 161 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 SRP72O76094 671 aaKnown RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 MYL2P10916 166 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 PALB2Q86YC2 1186 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 ZCCHC2Q9C0B9 1178 aaKnown RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 TSPAN16Q9UKR8 245 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 MRPS23Q9Y3D9 190 aaKnown RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 SV2AQ7L0J3 742 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 CCDC60Q8IWA6 550 aaPredicted RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 PHACTR4Q8IZ21 702 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 BRD8Q9H0E9 1235 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 VPS26AO75436 327 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 RAP1GDS1P52306 607 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 CAMK2GQ13555 558 aaPredicted RBP16.19■□□□□ 0.18
NEDD4-202ENST00000435532 ZNF438Q7Z4V0 828 aa16.19■□□□□ 0.18
NEDD4-202ENST00000435532 LZTR1Q8N653 840 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms