RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CYP4V2Q6ZWL3 525 aaPredicted RBP19.45■□□□□ 0.7
CLK1-205ENST00000434813 ANKMY2Q8IV38 441 aa19.45■□□□□ 0.7
CLK1-205ENST00000434813 UNC45BQ8IWX7 931 aa19.45■□□□□ 0.7
CLK1-205ENST00000434813 UBA3Q8TBC4 463 aa19.45■□□□□ 0.7
CLK1-205ENST00000434813 ACAP3Q96P50 834 aa19.45■□□□□ 0.7
CLK1-205ENST00000434813 WDR83Q9BRX9 315 aaKnown RBP19.45■□□□□ 0.7
CLK1-205ENST00000434813 CALN1Q9BXU9 219 aa19.45■□□□□ 0.7
CLK1-205ENST00000434813 DPP3Q9NY33 737 aa19.45■□□□□ 0.7
CLK1-205ENST00000434813 TSPAN16Q9UKR8 245 aa19.45■□□□□ 0.7
CLK1-205ENST00000434813 STRNO43815 780 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 SPAG7O75391 227 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 TMEM63AO94886 807 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 UBOX5O94941 541 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 RBP3P10745 1247 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 TSHRP16473 764 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 SPARCL1Q14515 664 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 NOMO1Q15155 1222 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 STILQ15468 1287 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 MSS51Q4VC12 460 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 FAM133BQ5BKY9 247 aaKnown RBP19.44■□□□□ 0.7
CLK1-205ENST00000434813 FNBP1LQ5T0N5 605 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 TRNP1Q6NT89 227 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 PARP9Q8IXQ6 854 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 PYROXD1Q8WU10 500 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 AFG1LQ8WV93 481 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 C16orf70Q9BSU1 422 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 DHRS4Q9BTZ2 278 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 KIF9Q9HAQ2 790 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 SSU72Q9NP77 194 aaKnown RBP19.44■□□□□ 0.7
CLK1-205ENST00000434813 MORF4L1Q9UBU8 362 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 RABGEF1Q9UJ41 708 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 RALGAPA2Q2PPJ7 1873 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 CITO14578 2027 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 A0A1B0GUA9 196 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 CFAP73A6NFT4 308 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 MNAT1P51948 309 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 ACVR2BQ13705 512 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 FAM183BPQ6ZVS7 135 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 SPATA18Q8TC71 538 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 NLRP7Q8WX94 980 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 NT5C1AQ9BXI3 368 aa19.44■□□□□ 0.7
CLK1-205ENST00000434813 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLK1-205ENST00000434813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.43■□□□□ 0.7
CLK1-205ENST00000434813 E5RJQ4 531 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 TFDP2Q14188 446 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 KLHL38Q2WGJ6 581 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 FAM47CQ5HY64 1035 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 SWT1Q5T5J6 900 aaKnown RBP19.43■□□□□ 0.7
CLK1-205ENST00000434813 RNF43Q68DV7 783 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 FAM71DQ8N9W8 422 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 CCDC63Q8NA47 563 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 RXFP2Q8WXD0 754 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 ACSS3Q9H6R3 686 aa19.43■□□□□ 0.7
CLK1-205ENST00000434813 TCRBV7S3A2A0A539 114 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 DPYSL4O14531 572 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 TYROBPO43914 113 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 PFKMP08237 780 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 PDGFRAP16234 1089 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 GRM5P41594 1212 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 HUNKP57058 714 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 ROR1Q01973 937 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 RNASELQ05823 741 aaKnown RBP19.42■□□□□ 0.7
CLK1-205ENST00000434813 OR6B2Q6IFH4 312 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 DPH6Q7L8W6 267 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 PDIK1LQ8N165 341 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 C4orf33Q8N1A6 199 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 FBXO36Q8NEA4 188 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 PIWIL1Q96J94 861 aaKnown RBP19.42■□□□□ 0.7
CLK1-205ENST00000434813 KATNBL1Q9H079 304 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 RXFP1Q9HBX9 757 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 XPO7Q9UIA9 1087 aaKnown RBP19.42■□□□□ 0.7
CLK1-205ENST00000434813 MGRN1O60291 552 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 SSTR1P30872 391 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 STIP1P31948 543 aaKnown RBP19.42■□□□□ 0.7
CLK1-205ENST00000434813 CDH6P55285 790 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 DPYSL3Q14195 570 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 SNCBQ16143 134 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 PDK4Q16654 411 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 GOLGA7BQ2TAP0 167 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 ZC3H12AQ5D1E8 599 aaKnown RBP19.42■□□□□ 0.7
CLK1-205ENST00000434813 SH3PXD2AQ5TCZ1 1133 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 CST9Q5W186 159 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 ZNF410Q86VK4 478 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 KIF12Q96FN5 646 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 PAIP2Q9BPZ3 127 aaKnown RBP19.42■□□□□ 0.7
CLK1-205ENST00000434813 PITPNM3Q9BZ71 974 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 KLHL14Q9P2G3 628 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 STARD13Q9Y3M8 1113 aa19.42■□□□□ 0.7
CLK1-205ENST00000434813 CHUKO15111 745 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 PRPSAP2O60256 369 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 RPA3P35244 121 aaPredicted RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 ADCYAP1R1P41586 468 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 NCALDP61601 193 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 ELF3P78545 371 aaPredicted RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 BASP1P80723 227 aaKnown RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 BNIP1Q12981 228 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 MMRN1Q13201 1228 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 EFTUD2Q15029 972 aaKnown RBP eCLIP19.41■□□□□ 0.74e-8■■■■□ 23.4
CLK1-205ENST00000434813 FAM110CQ1W6H9 321 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 DCAF4L1Q3SXM0 396 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms