RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SESN3P58005 492 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 MORC4Q8TE76 937 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 SEC14L1Q92503 715 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 ATXN7L3BQ96GX2 97 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 FAXDC2Q96IV6 333 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 PRMT7Q9NVM4 692 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-203ENST00000434376 hCG_1818297A0A087WSY0 165 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 CREB3O43889 395 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 DNAJC8O75937 253 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-203ENST00000434376 ZNF449Q6P9G9 518 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 PYROXD2Q8N2H3 581 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 FZD8Q9H461 694 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 HESX1Q9UBX0 185 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 C15orf41Q9Y2V0 281 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 ASB14A6NK59 587 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 PSTPIP1O43586 416 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 AFF1P51825 1210 aaKnown RBP16.28■□□□□ 0.2
SCARF1-203ENST00000434376 CCNA1P78396 465 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 RNASELQ05823 741 aaKnown RBP16.28■□□□□ 0.2
SCARF1-203ENST00000434376 FNBP1LQ5T0N5 605 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 KATNAL2Q8IYT4 538 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 NPLOC4Q8TAT6 608 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 FAM172AQ8WUF8 416 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 LPPQ93052 612 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 PEBP4Q96S96 227 aa16.28■□□□□ 0.2
SCARF1-203ENST00000434376 MCF2LO15068 1137 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 TREHO43280 583 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 RECQL4O94761 1208 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 HMGCRP04035 888 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 KRT16P08779 473 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 CYP3A5P20815 502 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 CDKN2BP42772 138 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 HIF1AQ16665 826 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 CAPRIN2Q6IMN6 1127 aaKnown RBP16.27■□□□□ 0.2
SCARF1-203ENST00000434376 MTHFD1LQ6UB35 978 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 TSHZ1Q6ZSZ6 1077 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 GPR142Q7Z601 462 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 FAF2Q96CS3 445 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 XPO7Q9UIA9 1087 aaKnown RBP16.27■□□□□ 0.2
SCARF1-203ENST00000434376 INPP5FQ9Y2H2 1132 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 CCDC195A0A1B0GUA6 201 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 SNAI1O95863 264 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-203ENST00000434376 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-203ENST00000434376 NQO1P15559 274 aaKnown RBP16.27■□□□□ 0.2
SCARF1-203ENST00000434376 SARNPP82979 210 aaKnown RBP16.27■□□□□ 0.2
SCARF1-203ENST00000434376 KLF1Q13351 362 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-203ENST00000434376 PPIL2Q13356 520 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 PTK6Q13882 451 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 TAF11Q15544 211 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 CNGA2Q16280 664 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 EMC10Q5UCC4 262 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 XYLT1Q86Y38 959 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 C3orf20Q8ND61 904 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 CCNYQ8ND76 341 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 FBXO36Q8NEA4 188 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 MAIP1Q8WWC4 291 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 P3H4Q92791 437 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 AGAP3Q96P47 875 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 TXLNGYQ9BZA5 131 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 SLC13A1Q9BZW2 595 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 PPP2R3BQ9Y5P8 575 aa16.27■□□□□ 0.2
SCARF1-203ENST00000434376 ABLIM1O14639 778 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 ASAP2O43150 1006 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 RPL22P35268 128 aaKnown RBP16.27■□□□□ 0.19
SCARF1-203ENST00000434376 PCK1P35558 622 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 TNFAIP2Q03169 654 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 LAMC2Q13753 1193 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 TAPT1Q6NXT6 567 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 VSIG1Q86XK7 387 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 NME8Q8N427 588 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 STKLD1Q8NE28 680 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 TMEM40Q8WWA1 233 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 ZNF317Q96PQ6 595 aaPredicted RBP16.27■□□□□ 0.19
SCARF1-203ENST00000434376 MED10Q9BTT4 135 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 NT5C1AQ9BXI3 368 aa16.27■□□□□ 0.19
SCARF1-203ENST00000434376 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.27■□□□□ 0.19
SCARF1-203ENST00000434376 C5orf60A6NFR6 353 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 SUN1O94901 812 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 KDELR1P24390 212 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 BMPR2Q13873 1038 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 PIGHQ14442 188 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-203ENST00000434376 LACTB2Q53H82 288 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-203ENST00000434376 PPM1NQ8N819 430 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCARF1-203ENST00000434376 TLCD1Q96CP7 247 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 ETNK1Q9HBU6 452 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 WHRNQ9P202 907 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 MED7O43513 233 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 TSPAN1O60635 241 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 AGTP01019 485 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 NUDT17P0C025 328 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 KRT4P19013 534 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 VCPP55072 806 aaKnown RBP16.26■□□□□ 0.19
SCARF1-203ENST00000434376 PITX1P78337 314 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-203ENST00000434376 ACVR2BQ13705 512 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 CYP1B1Q16678 543 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 TRNP1Q6NT89 227 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 CES3Q6UWW8 571 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 BZW1Q7L1Q6 419 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms