RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 GPR20Q99678 358 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 SLC30A3Q99726 388 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 PLCD4Q9BRC7 762 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 BCO2Q9BYV7 579 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 MIS12Q9H081 205 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 NSRP1Q9H0G5 558 aaKnown RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 SEMA4AQ9H3S1 761 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ASB7Q9H672 318 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 CYP3A43Q9HB55 503 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 UBN1Q9NPG3 1134 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ACP6Q9NPH0 428 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 PRMT7Q9NVM4 692 aaPredicted RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 SENP1Q9P0U3 644 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 BTBD7Q9P203 1132 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 SHOC2Q9UQ13 582 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 NUB1Q9Y5A7 615 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 LAMA3Q16787 3333 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TCRBV7S2A1N4TA0A589 114 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ASB14A6NK59 587 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ZBTB42B2RXF5 422 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 E7EVH7 732 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 MAGEB2O15479 319 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 CDH16O75309 829 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 CNMDO75829 334 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ITGAVP06756 1048 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 GSTA1P08263 222 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 KRT7P08729 469 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 HOXC6P09630 235 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 MCF2P10911 925 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 DRD4P21917 467 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 KLRC2P26717 231 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 HPDP32754 393 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 NOS2P35228 1153 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ADH7P40394 386 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 LAMTOR4Q0VGL1 99 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ADGRE1Q14246 886 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 MORF4L2Q15014 288 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 STILQ15468 1287 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ZC3H12AQ5D1E8 599 aaKnown RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 GKAP1Q5VSY0 366 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 HIBCHQ6NVY1 386 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 AADACL2Q6P093 401 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 SEPT14Q6ZU15 432 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF365Q70YC5 407 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ANKS1BQ7Z6G8 1248 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ADAT2Q7Z6V5 191 aaKnown RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 PCGF5Q86SE9 256 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 PNMA8AQ86V59 439 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 CACNA2D3Q8IZS8 1091 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ZCCHC9Q8N567 271 aaKnown RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 OTUD6BQ8N6M0 293 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 LINC01465Q8N7H1 131 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 OR5B17Q8NGF7 314 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ZDHHC1Q8WTX9 485 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ATXN2LQ8WWM7 1075 aaKnown RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 PRPF31Q8WWY3 499 aaKnown RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 CPA5Q8WXQ8 436 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 RAPGEF5Q92565 580 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 DCPSQ96C86 337 aaKnown RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 FGD4Q96M96 766 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 NCAPGQ9BPX3 1015 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 CCDC77Q9BR77 488 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 TRIM31Q9BZY9 425 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 XYLT2Q9H1B5 865 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ADAM7Q9H2U9 754 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 CDC42EP4Q9H3Q1 356 aaKnown RBP7.83□□□□□ -1.16
COL17A1-204ENST00000433822 PLEKHA4Q9H4M7 779 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 EFCC1Q9HA90 598 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 PCDH9Q9HC56 1237 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 EURLQ9NYK6 297 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ANKFY1Q9P2R3 1169 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 ASIC3Q9UHC3 531 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 KIAA1257Q9ULG3 409 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 SLC45A1Q9Y2W3 748 aa7.83□□□□□ -1.16
COL17A1-204ENST00000433822 hCG_1818297A0A087WSY0 165 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 RBM47A0AV96 593 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SIGLEC16A6NMB1 481 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF487B1APH4 448 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 DNALI1O14645 258 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 LIASO43766 372 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 CELF2O95319 508 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 TNNC2P02585 160 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SHBGP04278 402 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 EDN1P05305 212 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 RALAP11233 206 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 P4HA1P13674 534 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 NF2P35240 595 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 RDXP35241 583 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SOX11P35716 441 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 GABRB2P47870 512 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 TAS2R40P59535 323 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SPEM2Q0P670 501 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 TRPC3Q13507 836 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF268Q14587 947 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 PCBP1Q15365 356 aaKnown RBP eCLIP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 OASLQ15646 514 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF699Q32M78 642 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 TTC31Q49AM3 519 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 TFDP3Q5H9I0 405 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms