RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 HTRA1Q92743 480 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 ITFG2Q969R8 447 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 FERMT2Q96AC1 680 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 NTPCRQ9BSD7 190 aaKnown RBP6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 TMEM39BQ9GZU3 492 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 VPS16Q9H269 839 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 HAUS4Q9H6D7 363 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 IRAK4Q9NWZ3 460 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 HPCAL4Q9UM19 191 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 ZNF711Q9Y462 761 aa6.58□□□□□ -1.36
NIPAL3-205ENST00000432012 TARSL2A2RTX5 802 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 B4DLN1 442 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TCP10L2B9ZVM9 353 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 STXBP3O00186 592 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 USO1O60763 962 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CSPG5O95196 566 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 BMP15O95972 392 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 XBP1P17861 261 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 ITGA6P23229 1130 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 RGS2P41220 211 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 COPB1P53618 953 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 PPIGQ13427 754 aaKnown RBP eCLIP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 UAP1L1Q3KQV9 507 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TCP11X2Q5H9J9 407 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 MFSD14CQ5VZR4 134 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 NPNTQ6UXI9 565 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 DAAM2Q86T65 1068 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 EFCAB13Q8IY85 973 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CERS5Q8N5B7 392 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 VGLL2Q8N8G2 317 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 FANCBQ8NB91 859 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CHST14Q8NCH0 376 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 KREMEN2Q8NCW0 462 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 RPGRIP1Q96KN7 1286 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 SLC28A3Q9HAS3 691 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CNNM1Q9NRU3 951 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TOMM22Q9NS69 142 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 DNAJB12Q9NXW2 375 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TAB2Q9NYJ8 693 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TMOD4Q9NZQ9 345 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TRIM10Q9UDY6 481 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 RWDD2AQ9UIY3 292 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 GUCA1BQ9UMX6 200 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 REXO2Q9Y3B8 237 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 EPN1Q9Y6I3 576 aaPredicted RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 LAMA3Q16787 3333 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 SPDYE3A6NKU9 549 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 AQP12BA6NM10 295 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 KCNJ18B7U540 433 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 DCXO43602 365 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 DKC1O60832 514 aaKnown RBP eCLIP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 COBLO75128 1261 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 DGKIO75912 1065 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 UQCRFS1P1P0C7P4 283 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 FAM157BP0CG42 384 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 HNRNPLP14866 589 aaKnown RBP eCLIP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 ATP6V1B1P15313 513 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 GBP1P32455 592 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 KRT2P35908 639 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 IGHMBP2P38935 993 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 DPP6P42658 865 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 PHKA1P46020 1223 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 GTF2A1P52655 376 aaPredicted RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 KRT83P78385 493 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CDC16Q13042 620 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 PAK1Q13153 545 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 STIM1Q13586 685 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 KCNJ12Q14500 433 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 RRAGBQ5VZM2 374 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 IRGCQ6NXR0 463 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CEP68Q76N32 757 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 FAM35AQ86V20 835 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 ARHGEF39Q8N4T4 335 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TTLL11Q8NHH1 800 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 USP13Q92995 863 aaPredicted RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 GMCL1Q96IK5 515 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 FAM210AQ96ND0 272 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 FAM193BQ96PV7 902 aaPredicted RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 MMS19Q96T76 1030 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CHP1Q99653 195 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 RNF26Q9BY78 433 aaPredicted RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 NKX2-4Q9H2Z4 354 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 PLEKHA4Q9H4M7 779 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 GREM2Q9H772 168 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 TDRD3Q9H7E2 651 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 WHRNQ9P202 907 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 HDAC6Q9UBN7 1215 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 AGTPBP1Q9UPW5 1226 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 JRKLQ9Y4A0 524 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 SAR1BQ9Y6B6 198 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 CENPFP49454 3210 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 DOCK2Q92608 1830 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 MYH13Q9UKX3 1938 aa6.57□□□□□ -1.36
NIPAL3-205ENST00000432012 MAN1A2O60476 641 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 SMNDC1O75940 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PDE8BO95263 885 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 TNFRSF6BO95407 300 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ATP1A1P05023 1023 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MECP2P51608 486 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 TFF2Q03403 129 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms