RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 SNX30Q5VWJ9 437 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 MIEF2Q96C03 454 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 PAFAH2Q99487 392 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 DIABLOQ9NR28 239 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 DNAJC16Q9Y2G8 782 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 TRIM71Q2Q1W2 868 aaKnown RBP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 ISLR2Q6UXK2 745 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 RARBP10826 455 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 POU1F1P28069 291 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 POP1Q99575 1024 aaKnown RBP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 SPRTNQ9H040 489 aaPredicted RBP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 L2HGDHQ9H9P8 463 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 TRIM13O60858 407 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 KBTBD12Q3ZCT8 623 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 ANKRD49Q8WVL7 239 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 TRMT6Q9UJA5 497 aaKnown RBP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 KIAA0391O15091 583 aaKnown RBP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 GSTM1P09488 218 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 CUL2Q13617 745 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 MRPS26Q9BYN8 205 aaKnown RBP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 ANTXR2P58335 489 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 NCF4Q15080 339 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 NFIL3Q16649 462 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 WDCPQ9H6R7 721 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 NARFQ9UHQ1 456 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
RIMKLA-202ENST00000431473 CYBBP04839 570 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 FDPSP14324 419 aaKnown RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 GDPD5Q8WTR4 605 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 MKNK1Q9BUB5 465 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ROGDIQ9GZN7 287 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 SYNDIG1Q9H7V2 258 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 CYLDQ9NQC7 956 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ARHGEF3Q9NR81 526 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ZNF862O60290 1169 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 EPB42P16452 691 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 GSSP48637 474 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 EFCAB12Q6NXP0 572 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 IARS2Q9NSE4 1012 aaKnown RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 DAPK2Q9UIK4 370 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 GOLGA8TH3BQL2 631 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 TM9SF1O15321 606 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 BAIAP3O94812 1187 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 CDC16Q13042 620 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 DCUN1D5Q9BTE7 237 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 A2ML1A8K2U0 1454 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 SDR42E2A6NKP2 422 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 UBE2Q2LH0YL09 131 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 TRIM24O15164 1050 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 GLRA3O75311 464 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 SOAT2O75908 522 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 FGFR3P22607 806 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 RFX3P48380 749 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 RPS7P62081 194 aaKnown RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 PSMC6P62333 389 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 NEDD8Q15843 81 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 XKR3Q5GH77 459 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 NAPEPLDQ6IQ20 393 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 AGPAT3Q9NRZ7 376 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 EIF3LQ9Y262 564 aaKnown RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 NPHP4O75161 1426 aaPredicted RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 O00370 1275 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 FDFT1P37268 417 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ACADSBP45954 432 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ALFQ53S48 1182 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ZBTB49Q6ZSB9 765 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 GTF2A1LQ9UNN4 478 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ALDH1A1P00352 501 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 RAP1GAPP47736 663 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 SLC1A6P48664 564 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 STILQ15468 1287 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 IL25Q9H293 177 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 SPATA2Q9UM82 520 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 MICAL3Q7RTP6 2002 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 HEATR9A2RTY3 570 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 PRRG1O14668 218 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 DDHD2O94830 711 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 RRM2P31350 389 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 EFHC1Q5JVL4 640 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 C10orf53Q8N6V4 93 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 ACTRT1Q8TDG2 376 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
RIMKLA-202ENST00000431473 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms