RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 AMPD2Q01433 879 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 NFE2Q16621 373 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-206ENST00000431390 USP41Q3LFD5 358 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 PEX26Q7Z412 305 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 NT5DC3Q86UY8 548 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 ARNTL2Q8WYA1 636 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 FAM122AQ96E09 287 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 TMEM169Q96HH4 297 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 TLR10Q9BXR5 811 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 TMLHEQ9NVH6 421 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 SPG21Q9NZD8 308 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 AMFRQ9UKV5 643 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 BDP1A6H8Y1 2624 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 TMEM191CA6NGB0 347 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 TBC1D4O60343 1298 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 PPM1AP35813 382 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 SCNN1AP37088 669 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 MESDQ14696 234 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 RTP2Q5QGT7 225 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 PIGZQ86VD9 579 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 SPATA2LQ8IUW3 424 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-206ENST00000431390 HERC6Q8IVU3 1022 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 FUBP3Q96I24 572 aaKnown RBP eCLIP19.19■□□□□ 0.66
HMGN1-206ENST00000431390 ZBED2Q9BTP6 218 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 C1QTNF1Q9BXJ1 281 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 L2HGDHQ9H9P8 463 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 STK39Q9UEW8 545 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 ALG6Q9Y672 507 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 PATJQ8NI35 1801 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 GOLGA8SH3BPF8 625 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 BEST1O76090 585 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 SOD2P04179 222 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 KRT3P12035 628 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 SLC1A1P43005 524 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 MAP3K7CLP57077 242 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 SMARCB1Q12824 385 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 CFAP221Q4G0U5 840 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 OR6B2Q6IFH4 312 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 DCUN1D2Q6PH85 259 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 FAM183BPQ6ZVS7 135 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 FIBCD1Q8N539 461 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 SP7Q8TDD2 431 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-206ENST00000431390 FNIP1Q8TF40 1166 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 BTBD6Q96KE9 485 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 MCEEQ96PE7 176 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 RAD9AQ99638 391 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 SMOQ99835 787 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 HERC2P3Q9BVR0 1158 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 VN1R3Q9BXE9 311 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 GOLPH3Q9H4A6 298 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 PNPLA8Q9NP80 782 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 CHST7Q9NS84 486 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 IP6K2Q9UHH9 426 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 SNX12Q9UMY4 172 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 HYOU1Q9Y4L1 999 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 SAR1BQ9Y6B6 198 aa19.18■□□□□ 0.66
HMGN1-206ENST00000431390 GABBR2O75899 941 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 PROSCO94903 275 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 TCP1P17987 556 aaKnown RBP19.17■□□□□ 0.66
HMGN1-206ENST00000431390 MAN1A1P33908 653 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 RPL7AP62424 266 aaKnown RBP19.17■□□□□ 0.66
HMGN1-206ENST00000431390 SLC6A3Q01959 620 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 RPS6KA1Q15418 735 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 SLC39A12Q504Y0 691 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 TAS1R1Q7RTX1 841 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 SPRED2Q7Z698 418 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 DDX53Q86TM3 631 aaKnown RBP19.17■□□□□ 0.66
HMGN1-206ENST00000431390 ZMIZ2Q8NF64 920 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 PIK3R5Q8WYR1 880 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 CLP1Q92989 425 aaKnown RBP19.17■□□□□ 0.66
HMGN1-206ENST00000431390 HES6Q96HZ4 224 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 B3GALT6Q96L58 329 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 DMAP1Q9NPF5 467 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-206ENST00000431390 METTL5Q9NRN9 209 aaKnown RBP19.17■□□□□ 0.66
HMGN1-206ENST00000431390 PCDHB12Q9Y5F1 795 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 BACE2Q9Y5Z0 518 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 MRFAP1Q9Y605 127 aa19.17■□□□□ 0.66
HMGN1-206ENST00000431390 PAPSS1O43252 624 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-206ENST00000431390 NCK2O43639 380 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 GJB6O95452 261 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 OR4Q2P0C623 313 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 COMTP21964 271 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 BDNFP23560 247 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 RAB41Q5JT25 222 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 FAM102AQ5T9C2 384 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-206ENST00000431390 OLFML1Q6UWY5 402 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-206ENST00000431390 TRIM7Q9C029 511 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 MTRRQ9UBK8 725 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 CDC23Q9UJX2 597 aa19.16■□□□□ 0.66
HMGN1-206ENST00000431390 TMEM110-MUSTN1A8MSY1 372 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 MIF4GDA9UHW6 222 aaKnown RBP19.15■□□□□ 0.66
HMGN1-206ENST00000431390 PIK3R2O00459 728 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 LINC00271P0C7V0 271 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 GPR17Q13304 367 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 GPR65Q8IYL9 337 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 NIPA2Q8N8Q9 360 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 C2orf15Q8WU43 125 aaKnown RBP19.15■□□□□ 0.66
HMGN1-206ENST00000431390 EPHX3Q9H6B9 360 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 LRRC4Q9HBW1 653 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms