RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 ZNF394Q53GI3 561 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 CC2D1AQ6P1N0 951 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-207ENST00000430858 ARL14EPQ8N8R7 260 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-207ENST00000430858 MLKLQ8NB16 471 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 ZMIZ2Q8NF64 920 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 FAM3CQ92520 227 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 TATDN2Q93075 761 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 FBXO32Q969P5 355 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 TMEM176AQ96HP8 235 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 ZFYVE19Q96K21 471 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 CYP2S1Q96SQ9 504 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 SMOQ99835 787 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 FAM83CQ9BQN1 747 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 SRRTQ9BXP5 876 aaKnown RBP10.4□□□□□ -0.74
HDAC6-207ENST00000430858 FBXO44Q9H4M3 255 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 PNPLA8Q9NP80 782 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 GKN1Q9NS71 199 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 GTSE1Q9NYZ3 720 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 ARHGAP26Q9UNA1 814 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 CCL26Q9Y258 94 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 MTF2Q9Y483 593 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-207ENST00000430858 FAM92AA1XBS5 289 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 BEST1O76090 585 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 OLFM2O95897 454 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 ABL1P00519 1130 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 OAS1P00973 400 aaKnown RBP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 CCDC192P0DO97 292 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 ADORA2BP29275 332 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 RPS9P46781 194 aaKnown RBP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 SLC7A9P82251 487 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 IFRD2Q12894 506 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 USP4Q13107 963 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 MTF1Q14872 753 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 PDGFRLQ15198 375 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 ANGPT1Q15389 498 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 ZNF77Q15935 545 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 ITPRIPL2Q3MIP1 535 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 SNX30Q5VWJ9 437 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 CLEC20AQ6ZU45 233 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 RALGPS2Q86X27 583 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 C1orf210Q8IVY1 113 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 TRIM59Q8IWR1 403 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 KIAA1958Q8N8K9 716 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 SCAMP5Q8TAC9 235 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 ATOH1Q92858 354 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 CLDN23Q96B33 292 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 HEXIM2Q96MH2 286 aaKnown RBP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 IPO9Q96P70 1041 aaKnown RBP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 SLC22A12Q96S37 553 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 ARID3AQ99856 593 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.39□□□□□ -0.75
HDAC6-207ENST00000430858 PTPRDP23468 1912 aa10.39□□□□□ -0.75
HDAC6-207ENST00000430858 NUP210Q8TEM1 1887 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-207ENST00000430858 SPECC1L-ADORA2AF8WAN1 911 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 GOLGA6L22H0YM25 854 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
HDAC6-207ENST00000430858 CTHP32929 405 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 TUBP50607 506 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 RAD23BP54727 409 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 AMPD2Q01433 879 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 TNK2Q07912 1038 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 KCNH2Q12809 1159 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 LRMPQ12912 555 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 FZD5Q13467 585 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 RUNX3Q13761 415 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 HECTD3Q5T447 861 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 PPP1R26Q5T8A7 1209 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-207ENST00000430858 ARHGAP17Q68EM7 881 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 ZNF687Q8N1G0 1237 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 SLC4A11Q8NBS3 891 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 RIN3Q8TB24 985 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 SH3RF2Q8TEC5 729 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 OSCP1Q8WVF1 389 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 NT5C1BQ96P26 610 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 IER2Q9BTL4 223 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 DUSP16Q9BY84 665 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 RNF38Q9H0F5 515 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 EBF3Q9H4W6 596 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 HPS4Q9NQG7 708 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 CHORDC1Q9UHD1 332 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-207ENST00000430858 DACH1Q9UI36 760 aa10.38□□□□□ -0.75
HDAC6-207ENST00000430858 NDRG2Q9UN36 371 aaKnown RBP10.38□□□□□ -0.75
HDAC6-207ENST00000430858 HHLA1C9JL84 531 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 LEFTY2O00292 366 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 ZDHHC11BP0C7U3 371 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 SOX9P48436 509 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 IFNAR2P48551 515 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 SLC8A3P57103 927 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 ZXDBP98169 803 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 TRIM68Q6AZZ1 485 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 DDX42Q86XP3 938 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC6-207ENST00000430858 CPA6Q8N4T0 437 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 LMO3Q8TAP4 145 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 ATP2A3Q93084 1043 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 UBXN6Q9BZV1 441 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 CHRDQ9H2X0 955 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms