RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 TIPINQ9BVW5 301 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 PLVAPQ9BX97 442 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 IMPG2Q9BZV3 1241 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ELOVL4Q9GZR5 314 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ZNF302Q9NR11 478 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 IL1RAPL1Q9NZN1 696 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 PSMC3IPQ9P2W1 217 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 HEY2Q9UBP5 337 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 IP6K2Q9UHH9 426 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 XPO7Q9UIA9 1087 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 HACL1Q9UJ83 578 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 NME7Q9Y5B8 376 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 MAFBQ9Y5Q3 323 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 USH1CQ9Y6N9 552 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 LAMA2P24043 3122 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 MYO18AQ92614 2054 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 E2F8A0AVK6 867 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 SIGLEC16A6NMB1 481 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 SPDYE16A6NNV3 312 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ENO4A6NNW6 628 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 TJP3O95049 919 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ITGAVP06756 1048 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 KDELR1P24390 212 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ATP5DP30049 168 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 MIPP30301 263 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 MAN1A1P33908 653 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 BACE1P56817 501 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 GEMIN4P57678 1058 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 MRPS5P82675 430 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 CCDC15Q0P6D6 951 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 TRAF1Q13077 416 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 CDO1Q16878 200 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ZC3H12AQ5D1E8 599 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 GJC2Q5T442 439 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 C9orf131Q5VYM1 1079 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 FOXB2Q5VYV0 432 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 MAP1SQ66K74 1059 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 CDCA2Q69YH5 1023 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 C1orf228Q6PIY5 440 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 APBB1IPQ7Z5R6 666 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 XYLT1Q86Y38 959 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 TDRPQ86YL5 185 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 LPAR1Q92633 364 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 CFAP36Q96G28 342 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ACAP3Q96P50 834 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 WRNIP1Q96S55 665 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 TMEM120AQ9BXJ8 343 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 YIPF3Q9GZM5 350 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 NMUR2Q9GZQ4 415 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 PCDH9Q9HC56 1237 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 MRPL47Q9HD33 250 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ACSS2Q9NR19 701 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ZFP69BQ9UJL9 534 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 ACTL7BQ9Y614 415 aa7.51□□□□□ -1.21
COL28A1-202ENST00000430711 POLR2AP24928 1970 aaKnown RBP7.51□□□□□ -1.21
COL28A1-202ENST00000430711 A0A0G2JMZ2 1700 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 LRRC37A2A6NM11 1700 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 MEI4A8MW99 385 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 USP1O94782 785 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 DLDP09622 509 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 KITP10721 976 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 PTPRAP18433 802 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 HMGB2P26583 209 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 NEK3P51956 506 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 PGGT1BP53609 377 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 ARL4CP56559 192 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 PEX6Q13608 980 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CRYMQ14894 314 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 TARBP2Q15633 366 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 HSDL1Q3SXM5 330 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 XKR3Q5GH77 459 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 DRICH1Q6PGQ1 229 aaPredicted RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 ADGRD1Q6QNK2 874 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 RGS9BPQ6ZS82 235 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CROCCP2Q86T23 111 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 BRSK2Q8IWQ3 736 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 SLC25A41Q8N5S1 370 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 C12orf29Q8N999 325 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 NSUN6Q8TEA1 469 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 STK32AQ8WU08 396 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 PYROXD1Q8WU10 500 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 SKA1Q96BD8 255 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 MOCOSQ96EN8 888 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 NAF1Q96HR8 494 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 TCHPQ9BT92 498 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CALN1Q9BXU9 219 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 ACSS3Q9H6R3 686 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 NMRK1Q9NWW6 199 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 AGTPBP1Q9UPW5 1226 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 SCINQ9Y6U3 715 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 LOC285556D6RIA3 1793 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 SCN1AP35498 2009 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 SBF1O95248 1867 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 SOWAHBA6NEL2 793 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 TBX10O75333 385 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 FARP2O94887 1054 aaPredicted RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 PIGRP01833 764 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 KRT19P08727 400 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CSH1P0DML2 217 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms