RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 A0A1W2PPC4 97 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 ISM1B1AKI9 464 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 PRRT4C9JH25 899 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 APOL1O14791 398 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 YY2O15391 372 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 MPPED1O15442 326 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 VPS4BO75351 444 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 FGF18O76093 207 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 CSTBP04080 98 aaKnown RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 BRAFP15056 766 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 EN2P19622 333 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 CD6P30203 668 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 MPLP40238 635 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 MAPK9P45984 424 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 ARFIP2P53365 341 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 SUMO3P55854 103 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 GEMIN4P57678 1058 aaKnown RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 BTKQ06187 659 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 FOXI1Q12951 378 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 DAG1Q14118 895 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 IQCB1Q15051 598 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 PTPRRQ15256 657 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 CNGA2Q16280 664 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 TEDDM1Q5T9Z0 273 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 WDR78Q5VTH9 848 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 LMBRD2Q68DH5 695 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 PCGF5Q86SE9 256 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 CACNA2D3Q8IZS8 1091 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 ACTRT2Q8TDY3 377 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 TMEM41AQ96HV5 264 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 SLC46A1Q96NT5 459 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 P2RX7Q99572 595 aaKnown RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 DPH1Q9BZG8 443 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 TMX4Q9H1E5 349 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 MYLK2Q9H1R3 596 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZNF287Q9HBT7 754 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 KIAA1586Q9HCI6 787 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 ITM2CQ9NQX7 267 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 COL20A1Q9P218 1284 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZNF69Q9UC07 566 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 SHOC2Q9UQ13 582 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 TMX2Q9Y320 296 aa3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGB1P9-201ENST00000429856 A0A087WWL8 130 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 AQP12BA6NM10 295 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TISP43B9A030 160 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 B9A039 149 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 EYA2O00167 538 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 ADAMTS3O15072 1205 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TBC1D4O60343 1298 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 IL18RAPO95256 599 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 PYGLP06737 847 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 PARP1P09874 1014 aaKnown RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 PPP3CBP16298 524 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 CHRM3P20309 590 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TNFAIP3P21580 790 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 GATA3P23771 443 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 PPIFP30405 207 aaKnown RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 CXCR5P32302 372 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TECP42680 631 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TOB1P50616 345 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 RAB32Q13637 225 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 BLMHQ13867 455 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 STARD3Q14849 445 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZNF169Q14929 603 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 POSTNQ15063 836 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TAF5Q15542 800 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 PDCD2Q16342 344 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 RBM20Q5T481 1227 aaKnown RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 JAKMIP3Q5VZ66 844 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 KIAA0895LQ68EN5 471 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 LIN54Q6MZP7 749 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 JMJD6Q6NYC1 403 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 FAM109AQ8N4B1 249 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 SPATA5Q8NB90 893 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TOR1AIP2Q8NFQ8 470 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 SLC30A5Q8TAD4 765 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 CAGE1Q8TC20 777 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 LPIN2Q92539 896 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 FAM136AQ96C01 138 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 GCC1Q96CN9 775 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 FBXL20Q96IG2 436 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 MPP4Q96JB8 637 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 ISCA1Q9BUE6 129 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 ALG8Q9BVK2 526 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 TTYH3Q9C0H2 523 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 MAGEH1Q9H213 219 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 SMOC2Q9H3U7 446 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 R3HDMLQ9H3Y0 253 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 MRPS18AQ9NVS2 196 aaKnown RBP3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 XPR1Q9UBH6 696 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 OGDHLQ9ULD0 1010 aa3.5□□□□□ -1.85
HMGB1P9-201ENST00000429856 FAM234BA2RU67 622 aa3.49□□□□□ -1.85
HMGB1P9-201ENST00000429856 LGALS16A8MUM7 142 aa3.49□□□□□ -1.85
HMGB1P9-201ENST00000429856 BTN3A1O00481 513 aa3.49□□□□□ -1.85
HMGB1P9-201ENST00000429856 TRIM38O00635 465 aa3.49□□□□□ -1.85
HMGB1P9-201ENST00000429856 NCAM2O15394 837 aa3.49□□□□□ -1.85
HMGB1P9-201ENST00000429856 NXPH3O95157 252 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms