RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 USP27XA6NNY8 438 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 ANXA9O76027 345 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 MYO1DO94832 1006 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 OR1E1P30953 314 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 HTRA3P83110 453 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 CREMQ03060 361 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 FNDC3BQ53EP0 1204 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 CTU1Q7Z7A3 348 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 NXF3Q9H4D5 531 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 CPSF2Q9P2I0 782 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 A0A087X0T9 212 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 FAM228BP0C875 321 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 PTPN1P18031 435 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 ZNF200P98182 395 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 PCBP1Q15365 356 aaKnown RBP eCLIP17.76■□□□□ 0.433e-16■■■□□ 16
SMARCA4-203ENST00000429416 C16orf59Q7L2K0 433 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 SPG21Q9NZD8 308 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 KITP10721 976 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 ART3Q13508 389 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 DENND5BQ6ZUT9 1274 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 LGI2Q8N0V4 545 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 COG4Q9H9E3 785 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 MICAL2O94851 1124 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 GLUD1P00367 558 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 KCNJ1P48048 391 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 ZNF284Q2VY69 593 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 CELF6Q96J87 481 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 SERPINB11Q96P15 392 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 ACO2Q99798 780 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 C11orf49Q9H6J7 331 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 ATP13A1Q9HD20 1204 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 MLXIPLQ9NP71 852 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 PPP1R11O60927 126 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 TNFSF9P41273 254 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 LIG3P49916 1009 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 USP10Q14694 798 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 PREPLQ4J6C6 727 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 AGR3Q8TD06 166 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 NFKBIZQ9BYH8 718 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 SMYD3Q9H7B4 428 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 GIT1Q9Y2X7 761 aa17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 RGPD8O14715 1765 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-203ENST00000429416 C2orf81A6NN90 581 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 F8VZ95 297 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 CCL5P13501 91 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 OR1D2P34982 312 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 PMS1P54277 932 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 EEF1DP3Q658K8 133 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 SLC24A5Q71RS6 500 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 ABRAQ8N0Z2 381 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 SCLYQ96I15 445 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 SRPK1Q96SB4 655 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 ZMYM2Q9UBW7 1377 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.75■□□□□ 0.434e-7■■□□□ 11.7
SMARCA4-203ENST00000429416 WDR75Q8IWA0 830 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 DDIASQ8IXT1 998 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 OSGEPL1Q9H4B0 414 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 TFR2Q9UP52 801 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 TRAF3IP3Q9Y228 551 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 KIF3CO14782 793 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 TLE2Q04725 743 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 GRIK3Q13003 919 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 TRIM51Q9BSJ1 452 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 NT5MQ9NPB1 228 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 USP18Q9UMW8 372 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 CCDC151A5D8V7 595 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 LSM8O95777 96 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 KCNA2P16389 499 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 TMEM161BQ8NDZ6 487 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 ULBP1Q9BZM6 244 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 MARCH2Q9P0N8 246 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 SENP1Q9P0U3 644 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 ZNF212Q9UDV6 495 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 CHMP2BQ9UQN3 213 aa17.75■□□□□ 0.43
SMARCA4-203ENST00000429416 TRAV19A0A0A6YYK7 116 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 ARF4P18085 180 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 ATP5C1P36542 298 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 BRCC3P46736 316 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 RGS4P49798 205 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 SGCGQ13326 291 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 SPARCL1Q14515 664 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 ABHD15Q6UXT9 468 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 EPM2AIP1Q7L775 607 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 TNS4Q8IZW8 715 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 SNX12Q9UMY4 172 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 MYOM1P52179 1685 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 LAG3P18627 525 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 PBLDP30039 288 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 UGP2Q16851 508 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 SPATA4Q8NEY3 305 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 PPWD1Q96BP3 646 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 RAMP2O60895 175 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 JCHAINP01591 159 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 VCPP55072 806 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms