RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 JRKLQ9Y4A0 524 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SLC4A7Q9Y6M7 1214 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SCINQ9Y6U3 715 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 REV3LO60673 3130 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 ARHGEF37A1IGU5 675 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 WDR27A2RRH5 827 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 MTMR11A4FU01 709 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 SIGLEC16A6NMB1 481 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 F8VP50 259 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 PROSCO94903 275 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 CSPG5O95196 566 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 SOD2P04179 222 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 TUBB4AP04350 444 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 ATP2A2P16615 1042 aaKnown RBP9.34□□□□□ -0.91
SMC6-204ENST00000428868 RNASE9P60153 205 aaKnown RBP9.34□□□□□ -0.91
SMC6-204ENST00000428868 PITX1P78337 314 aaPredicted RBP9.34□□□□□ -0.91
SMC6-204ENST00000428868 SLC6A3Q01959 620 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 IFI16Q16666 785 aaKnown RBP9.34□□□□□ -0.91
SMC6-204ENST00000428868 C15orf59Q2T9L4 293 aaPredicted RBP9.34□□□□□ -0.91
SMC6-204ENST00000428868 USP41Q3LFD5 358 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 OTUD1Q5VV17 481 aaPredicted RBP9.34□□□□□ -0.91
SMC6-204ENST00000428868 TXNRD3NBQ6F5E7 133 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 PPP1R2P3Q6NXS1 205 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 PEX26Q7Z412 305 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
SMC6-204ENST00000428868 FIBCD1Q8N539 461 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 ATAD1Q8NBU5 361 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 STK32AQ8WU08 396 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 ALG3Q92685 438 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 TMEM169Q96HH4 297 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 HES6Q96HZ4 224 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 MS4A14Q96JA4 679 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 CAPZA3Q96KX2 299 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 SLC9A7Q96T83 725 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 CLSTN3Q9BQT9 956 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 ZBED2Q9BTP6 218 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 ULBP1Q9BZM6 244 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 CSNK1G1Q9HCP0 422 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 CHST7Q9NS84 486 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 SPG21Q9NZD8 308 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 TMEM59LQ9UK28 342 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 AMFRQ9UKV5 643 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 STRIP2Q9ULQ0 834 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 CDY1Q9Y6F8 540 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 MYO9BQ13459 2157 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 NUP205Q92621 2012 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 TRANK1O15050 2925 aa9.34□□□□□ -0.91
SMC6-204ENST00000428868 LINC01553A4QN01 128 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 OR6C75A6NL08 312 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 C2CD4BA6NLJ0 364 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 TLL1O43897 1013 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 FGF18O76093 207 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 KRT3P12035 628 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 CPB1P15086 417 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 DNAJB2P25686 324 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 PSMA2P25787 234 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 GJC1P36383 396 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 GLUD2P49448 558 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 PGFP49763 221 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 TKTL1P51854 596 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 DAOAP59103 153 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 ROR1Q01973 937 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 IFRD2Q12894 506 aaPredicted RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 ELAVL2Q12926 359 aaKnown RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 ZNF211Q13398 564 aaPredicted RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 RPS6KA1Q15418 735 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 SHHQ15465 462 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 DDR2Q16832 855 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 ATP13A4Q4VNC1 1196 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 RAB41Q5JT25 222 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 DCUN1D2Q6PH85 259 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 SCN4BQ8IWT1 228 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 DCP1BQ8IZD4 617 aaKnown RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 MSANTD4Q8NCY6 345 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 SCAMP5Q8TAC9 235 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 GPR152Q8TDT2 470 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 RXFP2Q8WXD0 754 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 PIK3R5Q8WYR1 880 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 KCTD13Q8WZ19 329 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 CLP1Q92989 425 aaKnown RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 ACSF2Q96CM8 615 aaPredicted RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 HSFY1Q96LI6 401 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 PEBP4Q96S96 227 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 LBHD1Q9BQE6 289 aaPredicted RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 C17orf80Q9BSJ5 609 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 CARD6Q9BX69 1037 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 MRPL47Q9HD33 250 aaKnown RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 DMAP1Q9NPF5 467 aaPredicted RBP9.33□□□□□ -0.92
SMC6-204ENST00000428868 KLHL11Q9NVR0 708 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 CALCOCO1Q9P1Z2 691 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 WDR35Q9P2L0 1181 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 CDC23Q9UJX2 597 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 SLC27A5Q9Y2P5 690 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 SAR1BQ9Y6B6 198 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 SZT2Q5T011 3432 aa9.33□□□□□ -0.92
SMC6-204ENST00000428868 NYNRINQ9P2P1 1898 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms