RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 INSL5Q9Y5Q6 135 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 TRIOBPQ9H2D6 2365 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 ANKRD62A6NC57 917 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 SOX1O00570 391 aaPredicted RBP8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 PER2O15055 1255 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 CCP110O43303 1012 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 CLASP2O75122 1294 aaKnown RBP8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 LRG1P02750 347 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 C8AP07357 584 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TMEM253P0C7T8 217 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 ATF6P18850 670 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 RRM1P23921 792 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 CLCN4P51793 760 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TKTL1P51854 596 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TWF1Q12792 350 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 KIF5AQ12840 1032 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 PLD1Q13393 1074 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TAF12Q16514 161 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 ARHGAP29Q52LW3 1261 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 FAM102AQ5T9C2 384 aaPredicted RBP8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 OR6B2Q6IFH4 312 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 FAM183BPQ6ZVS7 135 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 ADGRD2Q7Z7M1 963 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TCEAL8Q8IYN2 117 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 C17orf53Q8N3J3 647 aaPredicted RBP8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 SCAMP5Q8TAC9 235 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 GIPC2Q8TF65 315 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 KCTD13Q8WZ19 329 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TSGA10Q9BZW7 698 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 ISCUQ9H1K1 167 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 LZTFL1Q9NQ48 299 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 MAN1C1Q9NR34 630 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TRMT1Q9NXH9 659 aaKnown RBP8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 CTTNBP2NLQ9P2B4 639 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 HSFX1Q9UBD0 423 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 CNOT8Q9UFF9 292 aaKnown RBP8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 CHORDC1Q9UHD1 332 aaPredicted RBP8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 TFR2Q9UP52 801 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 SCINQ9Y6U3 715 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 A0A0C4DFX4 3053 aa8.33□□□□□ -1.08
HMGA1P4-201ENST00000428643 NCANO14594 1321 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 MACROD2A1Z1Q3 448 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 RCCD1A6NED2 376 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLC38A8A6NNN8 435 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 HHLA1C9JL84 531 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 PAPSS1O43252 624 aaPredicted RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 SART1O43290 800 aaKnown RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 FBXO21O94952 628 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 RTN3O95197 1032 aaPredicted RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 GJB6O95452 261 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZBED1O96006 694 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 USP17L7P0C7H9 530 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 EPCAMP16422 314 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 NOP2P46087 812 aaKnown RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 EPHB3P54753 998 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 NAP1L1P55209 391 aaKnown RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 GPC5P78333 572 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 PTP4A2Q12974 167 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 DUSP6Q16828 381 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 PPM1LQ5SGD2 360 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 DENND5BQ6ZUT9 1274 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 TMEM110Q86TL2 294 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 XYLT1Q86Y38 959 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZDHHC17Q8IUH5 632 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 SCUBE3Q8IX30 993 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 CCAR2Q8N163 923 aaKnown RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 NUP93Q8N1F7 819 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 ELMOD1Q8N336 334 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 C3orf20Q8ND61 904 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 RFFLQ8WZ73 363 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 GOLGA1Q92805 767 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 FBXO32Q969P5 355 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 FAM149B1Q96BN6 582 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 ARHGEF26Q96DR7 871 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 LRCH3Q96II8 777 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 VCPIP1Q96JH7 1222 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 SPATA17Q96L03 361 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 MCEEQ96PE7 176 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 SELENOOQ9BVL4 669 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 NUP85Q9BW27 656 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 ULBP1Q9BZM6 244 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 UBXN6Q9BZV1 441 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 TTYH1Q9H313 450 aaPredicted RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 FBXO44Q9H4M3 255 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 NSUN3Q9H649 340 aaKnown RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 IGFLR1Q9H665 355 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 AVENQ9NQS1 362 aaPredicted RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 CNGB3Q9NQW8 809 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 METTL5Q9NRN9 209 aaKnown RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 PARVAQ9NVD7 372 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 WDR35Q9P2L0 1181 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 TRIM10Q9UDY6 481 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 DPP7Q9UHL4 492 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 INTUQ9ULD6 942 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 MAGED2Q9UNF1 606 aaPredicted RBP8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 COL4A4P53420 1690 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms