RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ROR1Q01973 937 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 TAP1Q03518 808 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 ADCY1Q08828 1119 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 IFRD2Q12894 506 aaPredicted RBP12.69□□□□□ -0.38
RFC4-206ENST00000427785 SHHQ15465 462 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 TAF5Q15542 800 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 NFE2Q16621 373 aaPredicted RBP12.69□□□□□ -0.38
RFC4-206ENST00000427785 SDHAF4Q5VUM1 108 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 TRNP1Q6NT89 227 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 RNF19BQ6ZMZ0 732 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 TMEM110Q86TL2 294 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
RFC4-206ENST00000427785 SCN4BQ8IWT1 228 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 VPS52Q8N1B4 723 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 SIX6OS1Q8N1H7 587 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 ATAD1Q8NBU5 361 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 PHOSPHO2Q8TCD6 241 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 NDRG1Q92597 394 aaKnown RBP12.69□□□□□ -0.38
RFC4-206ENST00000427785 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 RAD9AQ99638 391 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 ULBP1Q9BZM6 244 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 ABCB6Q9NP58 842 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 CYLDQ9NQC7 956 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 AMFRQ9UKV5 643 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 USTQ9Y2C2 406 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 PCDHB5Q9Y5E4 795 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 ALG6Q9Y672 507 aa12.69□□□□□ -0.38
RFC4-206ENST00000427785 WDR27A2RRH5 827 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 LINC01553A4QN01 128 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CARNS1A5YM72 827 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 SIGLEC16A6NMB1 481 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 MYO1FO00160 1098 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 PROSCO94903 275 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CXCR5P32302 372 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 RFC1P35251 1148 aaPredicted RBP12.68□□□□□ -0.38
RFC4-206ENST00000427785 FLT3P36888 993 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 GRIK1P39086 918 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 NDUFV1P49821 464 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 SNX16P57768 344 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 SLC6A3Q01959 620 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 DSG1Q02413 1049 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 RPS6KA1Q15418 735 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
RFC4-206ENST00000427785 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 KCTD13Q8WZ19 329 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 KRT35Q92764 455 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CLP1Q92989 425 aaKnown RBP12.68□□□□□ -0.38
RFC4-206ENST00000427785 CAPZA3Q96KX2 299 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CALR3Q96L12 384 aaKnown RBP12.68□□□□□ -0.38
RFC4-206ENST00000427785 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 SEPT5Q99719 369 aaPredicted RBP12.68□□□□□ -0.38
RFC4-206ENST00000427785 ZBP1Q9H171 429 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CRISPLD1Q9H336 500 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CSNK1G1Q9HCP0 422 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 CHST7Q9NS84 486 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 IP6K2Q9UHH9 426 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 MTUS1Q9ULD2 1270 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 MRFAP1Q9Y605 127 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 MYO9BQ13459 2157 aa12.68□□□□□ -0.38
RFC4-206ENST00000427785 C2CD4BA6NLJ0 364 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 ZNF185O15231 689 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 DDX3YO15523 660 aaKnown RBP12.67□□□□□ -0.38
RFC4-206ENST00000427785 DAB1O75553 588 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 TCF4P15884 667 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 GPD1P21695 349 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 MAN1A1P33908 653 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 OR1D2P34982 312 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 SSR1P43307 286 aaKnown RBP12.67□□□□□ -0.38
RFC4-206ENST00000427785 SLC5A3P53794 718 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 GPR17Q13304 367 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 MGAT5BQ3V5L5 792 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 RAB41Q5JT25 222 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 SLC8B1Q6J4K2 584 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 HFE2Q6ZVN8 426 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 SLC26A9Q7LBE3 791 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 ZDHHC17Q8IUH5 632 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 COG1Q8WTW3 980 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 FAM149B1Q96BN6 582 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 HES6Q96HZ4 224 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
RFC4-206ENST00000427785 CLSTN3Q9BQT9 956 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 C17orf80Q9BSJ5 609 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 SMARCAL1Q9NZC9 954 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 EHD2Q9NZN4 543 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 TMEM59LQ9UK28 342 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 BACE2Q9Y5Z0 518 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
RFC4-206ENST00000427785 PDE4DIPQ5VU43 2346 aa12.66□□□□□ -0.38
RFC4-206ENST00000427785 KCNK3O14649 394 aa12.66□□□□□ -0.38
RFC4-206ENST00000427785 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
RFC4-206ENST00000427785 TRIM66O15016 1216 aa12.66□□□□□ -0.38
RFC4-206ENST00000427785 CAPN15O75808 1086 aa12.66□□□□□ -0.38
RFC4-206ENST00000427785 FBXO21O94952 628 aa12.66□□□□□ -0.38
RFC4-206ENST00000427785 CA3P07451 260 aa12.66□□□□□ -0.38
RFC4-206ENST00000427785 USP17L7P0C7H9 530 aa12.66□□□□□ -0.38
RFC4-206ENST00000427785 CTNNA2P26232 953 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms