RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CYP4V2Q6ZWL3 525 aaPredicted RBP14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 TMEM110Q86TL2 294 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SAPCD2Q86UD0 394 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 RELL1Q8IUW5 271 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 ARRDC4Q8NCT1 418 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SMG8Q8ND04 991 aaKnown RBP14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 MYCBPAPQ8TBZ2 947 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 ZNF473Q8WTR7 871 aaKnown RBP14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 C9orf72Q96LT7 481 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SERPINB12Q96P63 405 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 TSPAN18Q96SJ8 248 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 MAK16Q9BXY0 300 aaKnown RBP14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 FAM107BQ9H098 131 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 C10orf88Q9H8K7 445 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 RSAD1Q9HA92 442 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SAYSD1Q9NPB0 183 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 APOC4-APOC2K7ER74 178 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 NDC80O14777 642 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 APOC2P02655 101 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 PECAM1P16284 738 aaPredicted RBP14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 MAGEA4P43358 317 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 CRHR2Q13324 411 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 MORF4L2Q15014 288 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 SV2CQ496J9 727 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 CCDC38Q502W7 563 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 TNFAIP8L3Q5GJ75 292 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 ZNF618Q5T7W0 954 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 RNASEH2BQ5TBB1 312 aaKnown RBP14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 SCYL2Q6P3W7 929 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 SRLQ86TD4 932 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 FAM228AQ86W67 206 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 SCUBE3Q8IX30 993 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 TRPV1Q8NER1 839 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 APPL2Q8NEU8 664 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 RSAD2Q8WXG1 361 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 CCT8L2Q96SF2 557 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 GDAP2Q9NXN4 497 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 RRP15Q9Y3B9 282 aaKnown RBP14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 GMNCA6NCL1 334 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 PAPSS1O43252 624 aaPredicted RBP14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 TRAPPC3O43617 180 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 GABBR2O75899 941 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 CHN1P15882 459 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 DESP17661 470 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 LMO2P25791 158 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 CTGFP29279 349 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 SDC4P31431 198 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 BCAT1P54687 386 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 GDF10P55107 478 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 INHBEP58166 350 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 EIF3EP60228 445 aaKnown RBP14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 BST2Q10589 180 aaKnown RBP14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 KRT81Q14533 505 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 CYP4F22Q6NT55 531 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 TAF2Q6P1X5 1199 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 TAOK1Q7L7X3 1001 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 STK32AQ8WU08 396 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 FAM172AQ8WUF8 416 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 B3GNT5Q9BYG0 378 aa14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 NGRNQ9NPE2 291 aaKnown RBP14.65□□□□□ -0.06
APOBEC3D-202ENST00000427494 M0QZ92 97 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 MCF2LO15068 1137 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 DUSP11O75319 330 aaKnown RBP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 FAM107AO95990 144 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 ATP5DP30049 168 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 MRPS6P82932 125 aaKnown RBP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 DPYSL3Q14195 570 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 NPNTQ6UXI9 565 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 ZDHHC17Q8IUH5 632 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 ADGRF2Q8IZF7 708 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 CRYBG2Q8N1P7 616 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 MTG1Q9BT17 334 aaPredicted RBP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 DNAI2Q9GZS0 605 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 CTNNAL1Q9UBT7 734 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 SHOC2Q9UQ13 582 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 HUS1O60921 280 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 TCEA3O75764 348 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 ENDOD1O94919 500 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 LCP1P13796 627 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 CTCFP49711 727 aaPredicted RBP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 FAM47CQ5HY64 1035 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 GNASQ5JWF2 1037 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 PCGF5Q86SE9 256 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 UNC45BQ8IWX7 931 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 ANKRD52Q8NB46 1076 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 SPATA18Q8TC71 538 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 PRCCQ92733 491 aaPredicted RBP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 KHSRPQ92945 711 aaKnown RBP eCLIP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 CENPTQ96BT3 561 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 XPO6Q96QU8 1125 aaKnown RBP14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 CCDC77Q9BR77 488 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 GPATCH2LQ9NWQ4 482 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 CDY2AQ9Y6F7 541 aa14.64□□□□□ -0.07
APOBEC3D-202ENST00000427494 KPNA6O60684 536 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 ABHD2P08910 425 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 RDXP35241 583 aaKnown RBP14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 TFDP2Q14188 446 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 STAT4Q14765 748 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 BOLA3Q53S33 107 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms