RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 KIF1AQ12756 1690 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-202ENST00000427299 RGPD8O14715 1765 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-202ENST00000427299 EIF3JO75822 258 aaKnown RBP5.88□□□□□ -1.47
LINC00458-202ENST00000427299 IL33O95760 270 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 EDNRBP24530 442 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 FPGSQ05932 587 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 DYRK1AQ13627 763 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 ATP2B3Q16720 1220 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 CD300EQ496F6 205 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-202ENST00000427299 MAP9Q49MG5 647 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 GLIPR1L2Q4G1C9 344 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 ATAT1Q5SQI0 421 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 ADGRG5Q8IZF4 528 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 PDPRQ8NCN5 879 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 COG3Q96JB2 828 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 KRTAP1-5Q9BYS1 174 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 IPPQ9Y573 584 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 MSH6P52701 1360 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 LMO7Q8WWI1 1683 aa5.88□□□□□ -1.47
LINC00458-202ENST00000427299 KAT6AQ92794 2004 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 HMMRO75330 724 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 SUN1O94901 812 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 REC8O95072 547 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 AGFG2O95081 481 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 CHRM2P08172 466 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 ANXA11P50995 505 aaKnown RBP5.87□□□□□ -1.47
LINC00458-202ENST00000427299 NUCB2P80303 420 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 CCDC173Q0VFZ6 552 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 SRSF7Q16629 238 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC00458-202ENST00000427299 TWISTNBQ3B726 338 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-202ENST00000427299 GFOD2Q3B7J2 385 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 TMPRSS9Q7Z410 1059 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 DPF2Q92785 391 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 C7orf25Q9BPX7 421 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 CDK19Q9BWU1 502 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 GRPEL1Q9HAV7 217 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 STK26Q9P289 416 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 TNNQ9UQP3 1299 aa5.87□□□□□ -1.47
LINC00458-202ENST00000427299 SOS1Q07889 1333 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-202ENST00000427299 ZNF142P52746 1687 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-202ENST00000427299 MYH15Q9Y2K3 1946 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 CEP170BQ9Y4F5 1589 aaPredicted RBP5.86□□□□□ -1.47
LINC00458-202ENST00000427299 SLIT1O75093 1534 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 RGS12O14924 1447 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 USP6P35125 1406 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 ZNF804BA4D1E1 1349 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 GOLGA6CA6NDK9 693 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 GOLGA6BA6NDN3 693 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 LINC01548A6NM66 108 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 VWC2LB2RUY7 222 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 HTRA2O43464 458 aaPredicted RBP5.86□□□□□ -1.47
LINC00458-202ENST00000427299 SBK3P0C264 359 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 GOLGA6DP0CG33 693 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 ATF3P18847 181 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 MCCP23508 829 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 DDIT3P35638 169 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 MC2RQ01718 297 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 TFF2Q03403 129 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 ZNF844Q08AG5 666 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 BIRC2Q13490 618 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 UBE4AQ14139 1066 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 HLTFQ14527 1009 aaKnown RBP eCLIP5.86□□□□□ -1.47
LINC00458-202ENST00000427299 LLGL1Q15334 1064 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 MINDY4Q4G0A6 757 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 CYB5RLQ6IPT4 315 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 SLC35G2Q8TBE7 412 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 HPS3Q969F9 1004 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 KLHL32Q96NJ5 620 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 RPS6KC1Q96S38 1066 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 OBP2AQ9NY56 170 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 GOLGA6AQ9NYA3 693 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
LINC00458-202ENST00000427299 CAMTA1Q9Y6Y1 1673 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 MED1Q15648 1581 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-202ENST00000427299 ANKARQ7Z5J8 1434 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 PTPRUQ92729 1446 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 FLT4P35916 1363 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 TNRQ92752 1358 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 PLEKHG1Q9ULL1 1385 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 TTC21AQ8NDW8 1320 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 GCOM1H8Y6P7 765 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-202ENST00000427299 GRM6O15303 877 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 ZNF853P0CG23 659 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 PPP3CBP16298 524 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 PDCP20941 246 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 MCM2P49736 904 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 KIF23Q02241 960 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-202ENST00000427299 SLC10A2Q12908 348 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-202ENST00000427299 EIF2B5Q13144 721 aaKnown RBP5.85□□□□□ -1.47
LINC00458-202ENST00000427299 GBX1Q14549 363 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 KLHL40Q2TBA0 621 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 UTP14CQ5TAP6 766 aaKnown RBP5.85□□□□□ -1.47
LINC00458-202ENST00000427299 ANKRD45Q5TZF3 282 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 CLEC17AQ6ZS10 378 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 USP45Q70EL2 814 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 DGKHQ86XP1 1220 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 RHOT1Q8IXI2 618 aa5.85□□□□□ -1.47
LINC00458-202ENST00000427299 RPAP2Q8IXW5 612 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-202ENST00000427299 MIER2Q8N344 545 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms