RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 FOXR2Q6PJQ5 311 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 C15orf52Q6ZUT6 534 aaKnown RBP6.56□□□□□ -1.36
C9orf3-205ENST00000427193 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 GRAPLQ8TC17 118 aaPredicted RBP6.56□□□□□ -1.36
C9orf3-205ENST00000427193 SPATA5L1Q9BVQ7 753 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 LRRCC1Q9C099 1032 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 AJAP1Q9UKB5 411 aaPredicted RBP6.56□□□□□ -1.36
C9orf3-205ENST00000427193 SIK3Q9Y2K2 1263 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 MYH3P11055 1940 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 MROH5Q6ZUA9 1318 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 PDE8BO95263 885 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 EN2P19622 333 aaPredicted RBP6.55□□□□□ -1.36
C9orf3-205ENST00000427193 ALDH1B1P30837 517 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 SLC5A3P53794 718 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 SCAND1P57086 179 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 HSD11B2P80365 405 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 SIM1P81133 766 aaPredicted RBP6.55□□□□□ -1.36
C9orf3-205ENST00000427193 CXCL9Q07325 125 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 MGAT2Q10469 447 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 NOMO1Q15155 1222 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 ZNF529Q6P280 563 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 LDHAL6AQ6ZMR3 332 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 SKAP1Q86WV1 359 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 ERC1Q8IUD2 1116 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 UBR7Q8N806 425 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 OTUD7AQ8TE49 926 aaPredicted RBP6.55□□□□□ -1.36
C9orf3-205ENST00000427193 STON2Q8WXE9 905 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 CYFIP2Q96F07 1278 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 RTFDC1Q9BY42 306 aaPredicted RBP6.55□□□□□ -1.36
C9orf3-205ENST00000427193 VPS33BQ9H267 617 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
C9orf3-205ENST00000427193 PRO3102Q9H379 93 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 CASS4Q9NQ75 786 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 DMRT3Q9NQL9 472 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 DBNLQ9UJU6 430 aaKnown RBP6.55□□□□□ -1.36
C9orf3-205ENST00000427193 LRRC37AA6NMS7 1700 aa6.55□□□□□ -1.36
C9orf3-205ENST00000427193 ZNF804BA4D1E1 1349 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 DUOX1Q9NRD9 1551 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 ZNF609O15014 1411 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 MYADML2A6NDP7 307 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 CDK4P11802 303 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 CKBP12277 381 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 ALAS1P13196 640 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 RARRES1P49788 294 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 CHRNDQ07001 517 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 TFCP2Q12800 502 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 G3BP1Q13283 466 aaKnown RBP eCLIP6.54□□□□□ -1.36
C9orf3-205ENST00000427193 CYP2A13Q16696 494 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 ZNF362Q5T0B9 420 aaPredicted RBP6.54□□□□□ -1.36
C9orf3-205ENST00000427193 ANKRD45Q5TZF3 282 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 RASAL3Q86YV0 1011 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 ANKRD18AQ8IVF6 992 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 CHAC2Q8WUX2 184 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 KIAA1586Q9HCI6 787 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 FBXO34Q9NWN3 711 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 LRIT1Q9P2V4 623 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 SLC23A1Q9UHI7 598 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 DMTF1Q9Y222 760 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 ATP6V0A2Q9Y487 856 aa6.54□□□□□ -1.36
C9orf3-205ENST00000427193 SPTBN5Q9NRC6 3674 aaKnown RBP6.54□□□□□ -1.36
C9orf3-205ENST00000427193 MUC3AQ02505 3323 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 AOX1Q06278 1338 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 FAM171A2A8MVW0 826 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 IGLV2-14P01704 120 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 FPR1P21462 350 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 SLC6A2P23975 617 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 PDE1AP54750 535 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 MRPS35P82673 323 aaKnown RBP6.53□□□□□ -1.36
C9orf3-205ENST00000427193 SRSF2Q01130 221 aaKnown RBP6.53□□□□□ -1.36
C9orf3-205ENST00000427193 UBE4AQ14139 1066 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 KRT26Q7Z3Y9 468 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 COLGALT2Q8IYK4 626 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 AFAP1L2Q8N4X5 818 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.53□□□□□ -1.36
C9orf3-205ENST00000427193 NACC2Q96BF6 587 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 RBM17Q96I25 401 aaKnown RBP6.53□□□□□ -1.36
C9orf3-205ENST00000427193 SIL1Q9H173 461 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 LDAHQ9H6V9 325 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 IL1RAPL2Q9NP60 686 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 VTA1Q9NP79 307 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 SEMA4GQ9NTN9 838 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 C14orf119Q9NWQ9 140 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 FOXJ2Q9P0K8 574 aa6.53□□□□□ -1.36
C9orf3-205ENST00000427193 MTO1Q9Y2Z2 717 aaKnown RBP6.53□□□□□ -1.36
C9orf3-205ENST00000427193 TTC41PQ6P2S7 1318 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 PAPPA2Q9BXP8 1791 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 A0A1B0GUL7 405 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 CCDC78A2IDD5 438 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 ADM5C9JUS6 153 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 INO80B-WBP1J3KQ70 363 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 SNAP23O00161 211 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 PPIP5K2O43314 1243 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 PRSS23O95084 383 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 GSPT1P15170 499 aaKnown RBP6.52□□□□□ -1.37
C9orf3-205ENST00000427193 CPEP16870 476 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 IGHMBP2P38935 993 aaKnown RBP6.52□□□□□ -1.37
C9orf3-205ENST00000427193 GPR3P46089 330 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 VAV2P52735 878 aa6.52□□□□□ -1.37
C9orf3-205ENST00000427193 CACNA2D1P54289 1103 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms